Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2373g00001 ATGAAACACCCTTACAACCACCTTGGCGGCGGTGCTAACTCCGTTGCTCCTGGTTACTCCAAGGGCTCTGCTCTCGGTGCTGAAATTATCGGCACTTTTGTGCTTGTTTACACCGTTTTCTCTGCTACTGACCCAAAGAGAAGCGCACGTGACTCTCATGTCCCTGTTTTGGCTCCTTTGCCAATTGGTTTTGCTGTTTTCATGGTTCATCTCGCAACTATACCCATTACCGGTACCGGAATCAACCCTGCAAGGAGTTTTGGTGCTGCTGTTATCTTCAACAATGCCAAAGTTTGGGATGACCATTGGATCTTCTGGGTTGGACCGTTCGTGGGAGCAGCTGCTGCGGCTGCATACCATCAGTATATTCTCAGAGCGGCGGCTATCAAGGCGTTGGGCTCCTTCAGAAGCAATCCCACCAACTAA 426 0.5023 MKHPYNHLGGGANSVAPGYSKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNNAKVWDDHWIFWVGPFVGAAAAAAYHQYILRAAAIKALGSFRSNPTN 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2373g00001 141 FunFam Putative aquaporin PIP-type 7a 1 128 - -
Trme2373g00001 141 SUPERFAMILY Aquaporin-like 10 125 IPR023271 -
Trme2373g00001 141 Gene3D Glycerol uptake facilitator protein. 1 141 IPR023271 -
Trme2373g00001 141 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 2 130 IPR034294 -
Trme2373g00001 141 PRINTS Major intrinsic protein family signature 27 45 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme2373g00001 141 PRINTS Major intrinsic protein family signature 63 85 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme2373g00001 141 PRINTS Major intrinsic protein family signature 103 123 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme2373g00001 141 Pfam Major intrinsic protein 5 120 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme2373g00001 Trme-Chr2373 2030 2622 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme2373g00001 1 141 Major Intrinsic Protein MIP AT4G35100 90.071 6.99e-90 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme2373g00001 K09872 - vra:106761912 269.626