Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2367g00001 ATGACCGGAGTTAGTCCTGATAATAACTGCCTTATCATCAACAATTCCCTTTCTCTTCCATACGAAGACTTCTCCTTCATTTCCAATTATGGTGATCTGAAATACATAGCGGTTGTGAGATGCAAAATACCGGTAGATTATCACAACTATGGGAGTATTTCTTCAGAGAGGTGTGGTGGTGGAATTGATAGTGAGGAAAAGCAATTCTACTATTCATATGTTGTGGACATAGGAGACTACTATGTGAGTAACATAGCAGAGTCGTGCAGAATAGAGATGAAGGTAACGATGAGTAGTAGGTTGGATGGAAAGGTGAAATGTAATGATAAGAGCAAGTGTGAGTATCCAGATAAGGTTCACAGCGAGTATGCCAACGGAATTGAGCTTCGTTGGCGACCAATAAGCTGTGAGGACCAGCAGCAGCAAGACAGAGGCAATTCTGATTCACCGTCACTATCTCAATGTGGGAAAAGGAAACAACGATTGTCACTCCTCTGCATTCTGGTGGACATCTGCATTCATATCCTATTCACGCGAATGTCTGTATGGATTGTTGGAAAATTTGTTCTCGGGTCACCCTTTGTGGTTGCAGTCTTGATATGTAAATGGAGAAAAAAGCATATATCCATTTATGACACCGTTGAAGATTTTATCCAAAGTCACAATAATTTCATGCCCATCAGATACTCTTACTCGCAAATCAAAACAATGACTAAACGTTTCAAAAATAAGTTGGGTGAAGGAGGCTATGGGTCTGTCTATGAAGGAGAGCTTCGAAGCAAACGCAAAGTAGCTGTTAAGGTATTGACTAAGTCTCAAACCAATGGACAAGACTTCATCAACGAAGTTGCRACAATTGGAAGAATTCGTCATGTCAATGTGGTGCAGCTAATTGGATTTTGTGCCGAAAGAACAAAGCAAGCTCTGATCTACGAGTTCATGCCTAATGGTTCTCTTGATAAATACACATTTTCACAAGACCAAGGAAACTCATCCTCATTAAGCTACGATAAAATCTATGACATTGCTCTTGGAATTGCTCGTGGAATTCAATACTTACACCAAGGTTGTGACATGCAAATCATACATT 1090 0.4009 MTGVSPDNNCLIINNSLSLPYEDFSFISNYGDLKYIAVVRCKIPVDYHNYGSISSERCGGGIDSEEKQFYYSYVVDIGDYYVSNIAESCRIEMKVTMSSRLDGKVKCNDKSKCEYPDKVHSEYANGIELRWRPISCEDQQQQDRGNSDSPSLSQCGKRKQRLSLLCILVDICIHILFTRMSVWIVGKFVLGSPFVVAVLICKWRKKHISIYDTVEDFIQSHNNFMPIRYSYSQIKTMTKRFKNKLGEGGYGSVYEGELRSKRKVAVKVLTKSQTNGQDFINEVATIGRIRHVNVVQLIGFCAERTKQALIYEFMPNGSLDKYTFSQDQGNSSSLSYDKIYDIALGIARGIQYLHQGCDMQIIH 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2367g00001 363 SUPERFAMILY Protein kinase-like (PK-like) 218 363 IPR011009 -
Trme2367g00001 363 ProSitePatterns Protein kinases ATP-binding region signature. 245 267 IPR017441 GO:0005524
Trme2367g00001 363 Gene3D Phosphorylase Kinase; domain 1 213 313 - -
Trme2367g00001 363 FunFam serine/threonine-protein kinase PBS1-like 210 313 - -
Trme2367g00001 363 Pfam Protein tyrosine and serine/threonine kinase 241 355 IPR001245 GO:0004672|GO:0006468
Trme2367g00001 363 ProSiteProfiles Protein kinase domain profile. 239 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme2367g00001 363 PANTHER RUST RESISTANCE KINASE LR10-RELATED 211 363 IPR045874 GO:0004672
Trme2367g00001 363 SMART tyrkin_6 239 363 IPR020635 GO:0004713|GO:0006468
Trme2367g00001 363 Gene3D Transferase(Phosphotransferase) domain 1 314 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme2367g00001 Trme-Chr2367 1096 2695 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme2367g00001 189 363 Receptor kinase-like Gene Family AT1G66910 46.409 5.03e-46 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Trme2367g00001 PK_Tyr_Ser-Thr 2.4e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme2367g00001 - - tpra:123914142 499.59