Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2365g00001 ATGACAGACTCCATTTATAAGTACATAGTTCCTGTTGTGATATTCATTCCACCGGCAATGTTACCAAAAGCCGCGGCATACATTTATTTTGTTTGCATAGGTACATTGATATCGTTCGTTATGTGTATAGGGTTTTGTATAAAAGATCGTGGAAGGACACAAGAACTTCAATCTATTACTAGGAGAAATTCATGGTCTGTGAGGGAGCCTTACAGACCAAATTTAAGGGTCAACATGTCTTTTAACACAATCTCGGAGATTACTAGGTTGGCAATGAGAGCATTACCTCCAGTTAAAAATTTTGGTGGTGAAGATATGCAATGCCCTATTTGTCTAGAGGAGTTGAAGGCAGGAGAGTTGGTTCAACCTTTTGTTGTCTGCGCCCATGAATTTCACACATCGTGCCTTAACTCTTGGTTACGGGGAGGAGGAACTACTTGTCCGGTTTGTCGCCATGATTTGTTGTCTAACCATTAG 477 0.4067 MTDSIYKYIVPVVIFIPPAMLPKAAAYIYFVCIGTLISFVMCIGFCIKDRGRTQELQSITRRNSWSVREPYRPNLRVNMSFNTISEITRLAMRALPPVKNFGGEDMQCPICLEELKAGELVQPFVVCAHEFHTSCLNSWLRGGGTTCPVCRHDLLSNH 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2365g00001 158 ProSiteProfiles Zinc finger RING-type profile. 108 151 IPR001841 -
Trme2365g00001 158 SMART ring_2 108 150 IPR001841 -
Trme2365g00001 158 CDD RING-H2 108 151 - -
Trme2365g00001 158 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 27 153 IPR044675 -
Trme2365g00001 158 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 157 IPR013083 -
Trme2365g00001 158 Pfam Ring finger domain 107 151 IPR001841 -
Trme2365g00001 158 SUPERFAMILY RING/U-box 101 155 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme2365g00001 33 153 C3H Transcription Factor Family AT2G25410 33.071 3.33e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme2365g00001 - K15692 tpra:123914815 140.198