Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme23640g00001 ATGAGAACAATCATTTTTCAATCTGATATGCGGGCCAATGATCCTGTCGGCGGTTGTTATAAATATATTCAAGATCTTCAAGCTCAAATTGAATATTGTAAAATAGAACTTGATCTTGTTCTTCAACAACTCGCGGTTTTTCGAGCACAATCTCATCCTCAACAACAACAACAACAACAANNNCAACAACAACAACAACAACAAATGGTTAATTATGGTGATCAAGTTATTATGAATTCAGATTCATTGTTAGGTTTTTATAATCCATCTGGATCTGTTGTTCCGGCTACTGCGCCGGCTCATTATCATTACAATGTTCAACAAGTGGTGACACCATTACAAGAACATGAACAAGAACAATATCTTATGATGAATGAAAGTAATAGTAGTATTAATAGTACTACTACTTTGCAACAACATATTAATAATTGGGGGGCTATGCAAAACTCTATTTCTTTATCATCTTTGTCATTGCATGGACAGAGTAGTAATGCTAGTGATGAGTATGATCATAAGCCAACTCTTGATATACCTTGTGACGAAAGAAATGAATTAGGATTCGACTCTGGAGAAATACTTCACCACAG 587 0.3458 MRTIIFQSDMRANDPVGGCYKYIQDLQAQIEYCKIELDLVLQQLAVFRAQSHPQQQQQQQXQQQQQQQMVNYGDQVIMNSDSLLGFYNPSGSVVPATAPAHYHYNVQQVVTPLQEHEQEQYLMMNESNSSINSTTTLQQHINNWGAMQNSISLSSLSLHGQSSNASDEYDHKPTLDIPCDERNELGFDSGEILHH 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme23640g00001 195 MobiDBLite consensus disorder prediction 165 195 - -
Trme23640g00001 195 ProSiteProfiles LOB domain profile. 1 44 IPR004883 -
Trme23640g00001 195 MobiDBLite consensus disorder prediction 158 195 - -
Trme23640g00001 195 Pfam Lateral organ boundaries (LOB) domain 1 39 IPR004883 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme23640g00001 1 89 AS2 family AT3G13850 44.944 4.00e-20 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Trme23640g00001 LOB 2.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme23640g00001 - - cam:101515615 242.276