Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme23637g00001 ATGGTGCAAGGATACTCTGGCCATACCAAATATAGTGGGGGTCTGGATGTTGCTCGTAAGATTATAAAGGCTGATGGCATTCGGGGATTGTATCGAGGGTTTGGTCTTTCTGTTGTTACTTATTCACCTTCTAGCGCAGTTTGGTGGGCAAGTTATGGTTCAAGCCAACGCTACATTTGGAGATTGTTGGACCAAGGTGGAAAATATGACGAAGTTGCTCCAAGTGTGCCGAAGATTATGTTAGTTCAGGCTGCGGGAGGTATTATTGCTGGTGCAACTGCTTCCTGCATTACAACCCCATTGGATACTATCAAGACACG 320 0.4562 MVQGYSGHTKYSGGLDVARKIIKADGIRGLYRGFGLSVVTYSPSSAVWWASYGSSQRYIWRLLDQGGKYDEVAPSVPKIMLVQAAGGIIAGATASCITTPLDTIKTR 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme23637g00001 107 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 107 - -
Trme23637g00001 107 Pfam Mitochondrial carrier protein 6 59 IPR018108 -
Trme23637g00001 107 Pfam Mitochondrial carrier protein 82 107 IPR018108 -
Trme23637g00001 107 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 58 IPR018108 -
Trme23637g00001 107 ProSiteProfiles Solute carrier (Solcar) repeat profile. 78 107 IPR018108 -
Trme23637g00001 107 SUPERFAMILY Mitochondrial carrier 2 107 IPR023395 -
Trme23637g00001 107 Gene3D Mitochondrial carrier domain 1 107 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme23637g00001 Trme-Chr23637 14 1263 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme23637g00001 1 107 Chloroplast and Mitochondria Gene Families AT5G15640 77.778 6.07e-52 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme23637g00001 K15121 - gmx:100781796 186.808