Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme23601g00001 ACTGAAATGATTAAAAGAGGACACCTCAAAACACCATACCTGGGTCTGGCTAATAGCTTTAACAGGGTCTTTCTCGAAGAGGGTCTCCTTGCCTTTTGGAGAGGTCATCAGGCCAATGTTATAAGATATTTCCCCACACAGGCTTTCAATTTTGCATTCAAAGGTTACTTCAAAAGCATCTTTGGATATTCCAAAGACAAAGACGGGTACTTTAAGTGGTTTGCTGGGAATGTGGCTTCAGGCAGTGCTGCAGGAGCTACTACTTCAATGCTTTTGTACCATTTGGACTACGCACGTACAAGGTTGGCCACTGATGCAGTCGTGTGCCGTGTTACTGGTCAGCGTCACTTTAAAGGACTAATTGACGTATATCGTAAAACCTTATCTACGGATGGAATTGCCGGCTTGTACAGAGGATTTGGGGTTTCAATATTGGGAATCACCTTGTATCGAGGGATGTACTTTGGGATCTATGACACCATGAAGCCTATTGTTTTAGTTGGGCCTTTTGAG 513 0.4366 TEMIKRGHLKTPYLGLANSFNRVFLEEGLLAFWRGHQANVIRYFPTQAFNFAFKGYFKSIFGYSKDKDGYFKWFAGNVASGSAAGATTSMLLYHLDYARTRLATDAVVCRVTGQRHFKGLIDVYRKTLSTDGIAGLYRGFGVSILGITLYRGMYFGIYDTMKPIVLVGPFE 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme23601g00001 171 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 2 169 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trme23601g00001 171 SUPERFAMILY Mitochondrial carrier 9 165 IPR023395 -
Trme23601g00001 171 Pfam Mitochondrial carrier protein 73 164 IPR018108 -
Trme23601g00001 171 Pfam Mitochondrial carrier protein 15 62 IPR018108 -
Trme23601g00001 171 PRINTS Adenine nucleotide translocator signature 13 34 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trme23601g00001 171 PRINTS Adenine nucleotide translocator signature 46 58 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trme23601g00001 171 PRINTS Adenine nucleotide translocator signature 72 85 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trme23601g00001 171 ProSiteProfiles Solute carrier (Solcar) repeat profile. 72 164 IPR018108 -
Trme23601g00001 171 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 60 IPR018108 -
Trme23601g00001 171 Gene3D Mitochondrial carrier domain 1 170 IPR023395 -
Trme23601g00001 171 PRINTS Mitochondrial carrier protein signature 35 55 IPR002067 GO:0055085
Trme23601g00001 171 PRINTS Mitochondrial carrier protein signature 87 105 IPR002067 GO:0055085
Trme23601g00001 171 PRINTS Mitochondrial carrier protein signature 137 155 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme23601g00001 Trme-Chr23601 683 1285 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme23601g00001 2 171 Antiporters AT5G17400 78.235 2.95e-97 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme23601g00001 K05863 - gmx:100776735 306.99