Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2359g00001 ATGAGTGTGGGTGCTGTGTCACCAAAACCCTCAAACTGTAAAGCCTCTAGTCTTAGTACCGCTGTTTATCAGGCTCCAGGCTCAGGTAGGGCTCGAAGGGATGCGGCAGCACGTGCAATGCAAGGTTGGCATGCTCAGCGTCTTATGGGATATGGTGAGGTTGCTGAATCAGCTGTTAAGGACAAAAACTTCAGTCCCACACCACCAAAACGTGAAAAGAACCTCAAAAATATTGGTGTGATCAACAAACAGAGGACACCATCTGGTATGGACCATGCCGACAAAGCTGCAAATATAGAAGGAGATAGGCAGTTGGTCACAGCAGTAGTGGACATTGGACCCCCAGCTGACTGGGTGAAGATTAATGTTCGGGAAACGAAGGATAGCTTTGAAGTGTATGCACTAGTTCCTGGGCTCCTTCGTGAGGAGGTGCGAGTCCAATCCGATCCAGTTGGACGACTTGTTATAACTGGTATGCCAGAACATGTCGACAATCCTTGGGGATATACTGATGTTACAGTAGTTGTGAACTTACCTGCGAGGATTGATCCACTCCAGACATCTGCTGTTGTTAGTTTGCATGGTCGACTATTTGTACGTGTTCCTTTTGAGCAGGGAGCTGTATGA 627 0.4769 MSVGAVSPKPSNCKASSLSTAVYQAPGSGRARRDAAARAMQGWHAQRLMGYGEVAESAVKDKNFSPTPPKREKNLKNIGVINKQRTPSGMDHADKAANIEGDRQLVTAVVDIGPPADWVKINVRETKDSFEVYALVPGLLREEVRVQSDPVGRLVITGMPEHVDNPWGYTDVTVVVNLPARIDPLQTSAVVSLHGRLFVRVPFEQGAV 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2359g00001 208 FunFam AT-rich interactive domain-containing protein 3 99 207 - -
Trme2359g00001 208 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 107 208 IPR002068 -
Trme2359g00001 208 SUPERFAMILY HSP20-like chaperones 116 203 IPR008978 -
Trme2359g00001 208 CDD ACD_sHsps_p23-like 123 202 - -
Trme2359g00001 208 Gene3D - 103 207 IPR008978 -
Trme2359g00001 208 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 20 205 IPR045147 GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme2359g00001 Trme-Chr2359 125 2667 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme2359g00001 23 205 ARID Transcription Factor Family AT1G76510 69.945 3.78e-78 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme2359g00001 - - psat:127088333 334.339