Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme23591g00001 ATGATTATTCCAGTGCCAGCAACATCATCCTCTGCCTGCAAACAAGACCTGCCCTTAATAAATTTCCAAAAGGGACTCAACAAAATGGAATCATTATTTCATAATAGAAACAAAGATAAGGTGGTAGTGATTATGGGGGCCACAGGAACTGGAAAGACCAAATTAGCCATAGATTTGGCCAAACATTTTCAACCAGCTGAAATTGTGAATTCAGATAAAATGCAAGTTTATAAAGGTCTTGATATTACAACAAATAAGGTAACTGAACAAGAGTGTGATGGGGTCCCACACCATCTTTTAGGTGTATTTGATCCAAATTCAAATTTCAGTGCCAATGATTTTTGTTATCATGCTTGTTCAGCTATTGATTCAATTGTGGAAAAAGATGGATTACCAATTATTGCTGGTGGTTCAAATTCATATTTAGATGCTTTAGTGAATCATTGTAGTCAATTTAGGTTAAGGTATGAGTGTTGTTTTCTTTGGGTTGATGTTTCGCCGCATGTTCTTCATTCCTCGCTTCAATCGCGCGTTGATCGTATGATTGAAGCTGGTCAGTTAGATGAAGTTCGTGAATTTTTTGACCCGTTTGGGGATTATACAAAAGGGATTCGAAGAGCTATTGGGGTGCCTGAATTTCATGATTTTCTAATAGCGGAAGCAAATTCAGCGGATGAGAGAATTAAGAAGAGACTTTTGGAAGATGCCATTGATAGGCTCAAGATTAATAATTGCACGCTTGCGAATCGACAGGTTCAAAAGATTCGTCGATTAAATGGAATGTGGAAAAGGAGTATGCATCGTCTTGATGCCACTGAAACACACCTTAGGCGTGGTTCATATGCTAGTAAGGAGTCATGGGAGGATCACGTGCTTGCAAAAAGTCTTGTGATCCTCTACAATTTTCTTTACGGGGAAACACGAGTTCGCTCTAGAAGTGTTTCACCAAAAGATGTAATAGCCGCCTTTTCTGGTTCATCGCAGACACTAGCATTGCCTGCTATTGCGGCGGCGACTCATTAG 1023 0.3949 MIIPVPATSSSACKQDLPLINFQKGLNKMESLFHNRNKDKVVVIMGATGTGKTKLAIDLAKHFQPAEIVNSDKMQVYKGLDITTNKVTEQECDGVPHHLLGVFDPNSNFSANDFCYHACSAIDSIVEKDGLPIIAGGSNSYLDALVNHCSQFRLRYECCFLWVDVSPHVLHSSLQSRVDRMIEAGQLDEVREFFDPFGDYTKGIRRAIGVPEFHDFLIAEANSADERIKKRLLEDAIDRLKINNCTLANRQVQKIRRLNGMWKRSMHRLDATETHLRRGSYASKESWEDHVLAKSLVILYNFLYGETRVRSRSVSPKDVIAAFSGSSQTLALPAIAAATH 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme23591g00001 340 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 167 266 - -
Trme23591g00001 340 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 38 302 IPR039657 -
Trme23591g00001 340 Pfam IPP transferase 155 257 - -
Trme23591g00001 340 Pfam IPP transferase 75 150 - -
Trme23591g00001 340 Gene3D - 38 303 IPR027417 -
Trme23591g00001 340 FunFam Adenylate isopentenyltransferase 5, chloroplastic 167 266 - -
Trme23591g00001 340 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 198 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme23591g00001 Trme-Chr23591 85 1107 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme23591g00001 155 319 C2H2 Transcription Factor Family AT2G27760 33.508 2.37e-21 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme23591g00001 K10760 - gmx:100812928 475.707