Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme235842g00001 ATGGGCCCGGAATTAGCCGATGCGCTTCGTGGCTCAGTGGGACAGCTTAGTAGTCTAGTTAAAGTCATATCAGAAAATATCGGAATCACTGAAGAGCAGGCAGCTGCTGTTGGCCTCTTAGCTGATCTACCGGAGAGAGATTTAGGCCTCACGAGACAGCTACTGGATGAAGGTGCCTTTCGGATGGCCATATCAAAGGTGATTGCTATCAGGCAGGGAGAGATCAGGGGCACTCG 236 0.5127 MGPELADALRGSVGQLSSLVKVISENIGITEEQAAAVGLLADLPERDLGLTRQLLDEGAFRMAISKVIAIRQGEIRGTR 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme235842g00001 79 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme235842g00001 Trme-Chr235842 40 275 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme235842g00001 1 79 U-box Gene Family AT1G76390 70.000 4.86e-22 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme235842g00001 - - gmx:100815928 137.117