Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme23529g00001 ATGGAAGATGCTCAAACCAAAGCAAGAATCGAAGAAACAGTTCTTAAGATCCTCCACGAATCAAACATGGAAGAGGCAACTGAATCAAAGATTCGAAAACAAGCCTCCACCGAATTGGACCTAAACCTAAATCAGCCTCCATTCAAAGCTTTGGTGAAGCAAATCGTCGAAGCTTTTCTTGTAGAGAAGCAACAACAACAGCAGGACGAAGAAGAAGAAAAACAGCGAGAGAAAGAAGGAGTTTCCAGCAAAAGCGATCTCGTCATCTGCAAGCTTACGAAAAAGAGAAGGATAACCATTCGGGATTACGAAGGGATAAGGTATGTCTCCATTCGGGAGTTTTACACCAAGGATAACAAGGAATTTGCTTCATCTAAAG 379 0.4169 MEDAQTKARIEETVLKILHESNMEEATESKIRKQASTELDLNLNQPPFKALVKQIVEAFLVEKQQQQQDEEEEKQREKEGVSSKSDLVICKLTKKRRITIRDYEGIRYVSIREFYTKDNKEFASSK 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme23529g00001 126 Pfam DEK C terminal domain 6 60 IPR014876 -
Trme23529g00001 126 SUPERFAMILY DEK C-terminal domain 5 60 - -
Trme23529g00001 126 MobiDBLite consensus disorder prediction 65 84 - -
Trme23529g00001 126 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 4 61 IPR014876 -
Trme23529g00001 126 SUPERFAMILY ssDNA-binding transcriptional regulator domain 89 122 IPR009044 GO:0003677|GO:0006355
Trme23529g00001 126 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 5 126 IPR045125 GO:0003713|GO:0060261
Trme23529g00001 126 Gene3D Transcriptional Coactivator Pc4; Chain A 66 126 IPR009044 GO:0003677|GO:0006355
Trme23529g00001 126 Pfam Transcriptional Coactivator p15 (PC4) 90 121 IPR003173 GO:0003677|GO:0006355
Trme23529g00001 126 Coils Coil 60 80 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Trme23529g00001 DEK_C 2.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme23529g00001 K25815 - gmx:100305633 132.109