Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme23469g00001 ATGATTTCCAAGTTACCAGACCTACTTTCCTGCAATCCCTCCAAAAGGGTGTTGCCAAAGTTTCAATTTTTTCTCTCCAAAGGTGCTTCTAAATCTGACATTGTTAACCTTGTTAGTAAGAACCCTAGAGTCTTGTCTCCAAGCCTGAAGAATCACATAGTCCCAACCTATGAATGGGTTTATAGAATCTTGAAATCTCATAAGGAGACTATTGCTCTTGTGATTCTTGATCCAGCTTTCCATGGAGGCAATCATGTGCCTTCTAACATCAGATTGCTTATCGAGAATGGAGTGTCCGACTCAAACATTGCAAGATTGCTTCGGAACTGGGTTCAGGTATTCCGGACACATGACATGCTGAAGTTGGTGGAGGAATTAAAGGATTTGGGGTTTAAACCTACACAAACAACTTTCGCAATAGCATTGCATGCCAAAACATATGTAATCGAAAACATGTGGAAAGAGAAAGTCGATGCCTTTAAGAAATGGGGTTGGTCCGATGAAGATGTTGTGAATGCATTTAAAAAGCAGCCTTACTGTATGTTAGTATCCATTGATAAAATTAATTTATTGATGAGTTTTTGGGTTGATCAGTTGGGTTGGGATCCTCTTGTCCTTGCCAAAGGACCGTCACTTTTTTTGTTAAGTTTGGAAAAAAGGATCATTCCTAGGGCCGAAGTAGTGCAATTTCTGCTGAAGAAAGGTTTGCGGAAAAAGAATGCAAGCTTAACTTGTCCATTTGTTGTGCCTGAGAAGTTGTTTCTTGATATGTTTATAAATCGTTTTAAGGAGTCTTCTTATCTATCTAAGTTGTACCAGGAAAAACTCAATCTTCCATGCACTAGAGATAAAACTTGCATGTCATGGTCCAAGGTGTTTTAG 882 0.39 MISKLPDLLSCNPSKRVLPKFQFFLSKGASKSDIVNLVSKNPRVLSPSLKNHIVPTYEWVYRILKSHKETIALVILDPAFHGGNHVPSNIRLLIENGVSDSNIARLLRNWVQVFRTHDMLKLVEELKDLGFKPTQTTFAIALHAKTYVIENMWKEKVDAFKKWGWSDEDVVNAFKKQPYCMLVSIDKINLLMSFWVDQLGWDPLVLAKGPSLFLLSLEKRIIPRAEVVQFLLKKGLRKKNASLTCPFVVPEKLFLDMFINRFKESSYLSKLYQEKLNLPCTRDKTCMSWSKVF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme23469g00001 293 Pfam mTERF 150 249 IPR003690 GO:0003690|GO:0006355
Trme23469g00001 293 Pfam mTERF 2 132 IPR003690 GO:0003690|GO:0006355
Trme23469g00001 293 Gene3D Transcription termination factor 3, mitochondrial 85 266 IPR038538 -
Trme23469g00001 293 Gene3D Transcription termination factor 3, mitochondrial 1 84 IPR038538 -
Trme23469g00001 293 PANTHER CGI-12 PROTEIN-RELATED 1 261 IPR003690 GO:0003690|GO:0006355
Trme23469g00001 293 SMART mt_12 104 132 IPR003690 GO:0003690|GO:0006355
Trme23469g00001 293 SMART mt_12 203 237 IPR003690 GO:0003690|GO:0006355
Trme23469g00001 293 SMART mt_12 1 30 IPR003690 GO:0003690|GO:0006355
Trme23469g00001 293 SMART mt_12 35 66 IPR003690 GO:0003690|GO:0006355
Trme23469g00001 293 SMART mt_12 171 202 IPR003690 GO:0003690|GO:0006355
Trme23469g00001 293 FunFam Mitochondrial transcription termination factor-like 49 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme23469g00001 Trme-Chr23469 265 1146 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trme23469g00001 mTERF 4.7e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme23469g00001 K15031 - gmx:102663414 295.049