LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trme2345g00001	GGATGTGATGCATCTGTACTATTGGATGACACTGGCACATTTGTCGGTGAGAAAAATGCCGGACCTAACAAAAATTCAGCTAGGGGTTTTGAAGTGATTGATACTATTAAAACCAAAGTTGAAGCTGCTTGCAAATCCAAAGTTTCTTGTGCGGATATTCTAGCACTTGCAACTAGAGATGGAATAGTCTTGCTAGTTGAAGATCACCGAAGATTGAAATCAATGCATTCTCAACAGGAGTAA	243	0.3951	GCDASVLLDDTGTFVGEKNAGPNKNSARGFEVIDTIKTKVEAACKSKVSCADILALATRDGIVLLVEDHRRLKSMHSQQE	80

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trme2345g00001	80	PRINTS	Plant peroxidase signature	47	57	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Trme2345g00001	80	PRINTS	Plant peroxidase signature	28	41	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Trme2345g00001	80	SUPERFAMILY	Heme-dependent peroxidases	1	65	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Trme2345g00001	80	Gene3D	-	1	79	-	-
	Trme2345g00001	80	ProSiteProfiles	Plant heme peroxidase family profile.	1	64	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Trme2345g00001	80	PANTHER	PEROXIDASE 72-RELATED	1	64	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Trme2345g00001	80	Pfam	Peroxidase	1	65	IPR002016	GO:0004601\|GO:0006979\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trme2345g00001	Trme-Chr2345	636	948	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trme2345g00001	1	64	Peroxidase	AT1G44970	68.750	3.45e-26	96.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trme2345g00001	K00430		-	ming:122094208	115.931