Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme23449g00001 ATGATGTCTGGCACAAGTATGGCTGCACCACATATTGCAGGTCTTGCTGCGTTAATTAAGCAAAAGTTCCCGAATTTTAGTCCTGCAGCCATTGCTTCTGCACTTTCGACTACTGCTTCTCAGAATGACAAGAGTGGCGGACCAATAATGGCTCAGCGATCATACGCTTTTCCAGATCTAAGCCAAACTCCGGCTACTCCTTTTGACATGGGAAGTGGTTTTGTGAATGCAACTGGAGCATTGAATCCGGGTTTAATCTTTGATTCCAGTTATGACGATTACATGTCATTTTTATGCGGTATCAACGGTTCAGCGCCTGTGGTACTAAACTACACCGGTCAAAATTGTTTACTTTATAACTCAACTCTATATGGTCCTGATCTAAACTTGCCTTCAATCACTCTAGCAAAGCTAAACCAATCGACAATTGTGCAAAGAACAGTTCAAAACATTGCTGGAAATAATGAAACTTACAGTGTTGGTTGGAATGCTCCTTTCGGCGTTTCAGTGAAAGTAACTCCGACACACTTTTCTATCGGCAACGGCGAAAAGCAAGTCTTGTCTGTGATCTTGAATGCAACCGCGAATAATTCTGTTGCCAGCTTTGGAAAGATTGGTTTGTTTGGTGATCAAG 634 0.4227 MMSGTSMAAPHIAGLAALIKQKFPNFSPAAIASALSTTASQNDKSGGPIMAQRSYAFPDLSQTPATPFDMGSGFVNATGALNPGLIFDSSYDDYMSFLCGINGSAPVVLNYTGQNCLLYNSTLYGPDLNLPSITLAKLNQSTIVQRTVQNIAGNNETYSVGWNAPFGVSVKVTPTHFSIGNGEKQVLSVILNATANNSVASFGKIGLFGDQ 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme23449g00001 211 Gene3D - 98 208 - -
Trme23449g00001 211 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 185 IPR045051 -
Trme23449g00001 211 Pfam Fibronectin type-III domain 127 205 IPR041469 -
Trme23449g00001 211 Gene3D Peptidase S8/S53 domain 1 94 IPR036852 GO:0004252|GO:0006508
Trme23449g00001 211 ProSiteProfiles Serine proteases, subtilase domain profile. 1 81 - -
Trme23449g00001 211 Pfam Subtilase family 1 44 IPR000209 GO:0006508|GO:0008236
Trme23449g00001 211 ProSitePatterns Serine proteases, subtilase family, serine active site. 4 14 IPR023828 -
Trme23449g00001 211 SUPERFAMILY Subtilisin-like 2 137 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme23449g00001 Trme-Chr23449 425 1246 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme23449g00001 1 211 Subtilisin-like Serine Gene Family AT1G30600 67.136 6.02e-94 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme23449g00001 - - gmx:100796456 357.451