Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme234122g00001 ATGCTATCAAAGTTGATGGACTTTCTAAGCGCCTGTTGGCGGAGAAGATCCTCGGACCGAAAATCATCCGATGTTTCAGGGAAGAAAGAAGGTCTGCTTTGGTACAAGGATGCTGGACAGCATCTTTTTGGTGATTATTCTATGGCTGTTGTGCAGGCTAATAACCTGCTTGAAGATCAGAGTCAGATTGAGTCTGGTCCTCTTAGTTTCCTTGATACTGGTCCTTATGGTACTTTTGTTGGTGTTTATGATGGTCATGGTGGACCCGAGACTTCTCGTTTCATTTGTGATCACCTCTTTCAACATTTGAAACGTAAT 318 0.4308 MLSKLMDFLSACWRRRSSDRKSSDVSGKKEGLLWYKDAGQHLFGDYSMAVVQANNLLEDQSQIESGPLSFLDTGPYGTFVGVYDGHGGPETSRFICDHLFQHLKRN 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme234122g00001 106 ProSitePatterns PPM-type phosphatase domain signature. 79 87 IPR000222 GO:0043169
Trme234122g00001 106 Gene3D - 14 106 IPR036457 -
Trme234122g00001 106 SUPERFAMILY PP2C-like 53 105 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme234122g00001 Trme-Chr234122 1 318 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme234122g00001 1 105 PP2C-type Phosphatase Gene Family AT3G51370 77.143 5.68e-51 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme234122g00001 K01102 - gmx:100777920 191.045