Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme23410g00001 GCATCTGAAGAATATATTAGAGAGCTTTTTGATAAAGCAAAAAGGACTGCTCCGTCAATTGTCTTTATTGATGAGATTGATGCAATTGCTTCGAAAAGAGAGAATTTACAGCGTGAAATGGAGAAACGAATTGTGACACAGTTAATGACTTCCATGGATGAGCCGGAGAGTTCTGATGAACCTCGTGGCTATGTTCTTGTAATTGGAGCCACAAATAGGCCTGATTCTCTTGACCCTGCTCTTAGACGGCCTGGTAGGTTTGATCGTGAGTTTTTTGTTGGCGTTCCTGATGAATCTGCCAGGGAGGAGATCCTTTCCGTGCTTACTCGCAATCTTAAACTTGATGGTTCATTTGATCTGCGCAAAATAGCCAGGTCTACGCCAGGATTTGTTGGTGCTGATTTGGCAGCTCTGGCTAACAAAGCTGGTAATCTGGCAATGAAGAGGATAATCGATGAAAGGAAACGTGAATTATCTCAAGATCTCATGAGTGAGAATACAAAAGGCTGGTGGAGAGAACCTTGGTTGCCTGAAGAAATAAATAAGCTTGCTATCAAAATGTCTGATTTTGAGGAAGCAGCCAAAATGGTGCAACCTTCAGCAAGAAGAGAAGGGTTCTCTTCCATTCCTAATGTCAAATGGGAAGATGTTGGTGGGCTTGATATTTTAAGGCATGAGTTTGATCGCTATATTGTAAGGCGTATAAAATATCCTGAGTATTATGAGGTAATTTTTTAA 738 0.4106 ASEEYIRELFDKAKRTAPSIVFIDEIDAIASKRENLQREMEKRIVTQLMTSMDEPESSDEPRGYVLVIGATNRPDSLDPALRRPGRFDREFFVGVPDESAREEILSVLTRNLKLDGSFDLRKIARSTPGFVGADLAALANKAGNLAMKRIIDERKRELSQDLMSENTKGWWREPWLPEEINKLAIKMSDFEEAAKMVQPSARREGFSSIPNVKWEDVGGLDILRHEFDRYIVRRIKYPEYYEVIF 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme23410g00001 245 Gene3D - 1 94 IPR027417 -
Trme23410g00001 245 PANTHER AAA-FAMILY ATPASE 2 242 - -
Trme23410g00001 245 Pfam AAA+ lid domain 118 153 IPR041569 -
Trme23410g00001 245 Gene3D - 96 204 - -
Trme23410g00001 245 ProSitePatterns AAA-protein family signature. 65 83 IPR003960 GO:0005524|GO:0016887
Trme23410g00001 245 Pfam ATPase family associated with various cellular activities (AAA) 2 94 IPR003959 GO:0005524|GO:0016887
Trme23410g00001 245 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 201 IPR027417 -
Trme23410g00001 245 FunFam Cell division control protein 48 homolog C 96 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme23410g00001 Trme-Chr23410 198 1169 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme23410g00001 2 245 Calmodulin-binding Proteins AT3G56690 30.976 1.26e-40 146