Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme234109g00001 ATGTTCATGACTAATGTTCTTATTTCCTCTTTACAGGCCGAGGCTGAAGAACTGGCACGAAGAGTTGATGCATTGACTTCTGAGAATTTGTTGCTGAAATCAGAAATGAATGAATTGGCTCAAAACTCTGAGAAGCTGAAGATGGAAAATGCTACATTAAAG 162 0.3827 MFMTNVLISSLQAEAEELARRVDALTSENLLLKSEMNELAQNSEKLKMENATLK 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme234109g00001 54 Coils Coil 8 54 - -
Trme234109g00001 54 Pfam bZIP transcription factor 12 50 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme234109g00001 12 53 bZIP Transcription Factor Family AT2G46270 61.905 2.41e-11 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trme234109g00001 bZIP_1 1.1e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme234109g00001 K09060 - csin:114260757 62.3882