Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme23301g00001 ATGTTTGATCTGTTCATGAAATACAGGATTTGCCACAACTTGTATGATTTGCTAATGGCACACAAAGAAGAGTTAGCACAACTTATAACCTTGGAGCAAGGAAAGCCTCTTAAAGAGTCTCTGGGTGAGATAAATTACAGTGCTGGCTTTATTGAGTTTGCATCGGAGGAGGCAAAACGTATATATGGGGATATAATTCCTGCACCTCAATCTGATCGGCGGTTATTTGTTTTAAAGCAG 240 0.3958 MFDLFMKYRICHNLYDLLMAHKEELAQLITLEQGKPLKESLGEINYSAGFIEFASEEAKRIYGDIIPAPQSDRRLFVLKQ 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme23301g00001 80 Pfam Aldehyde dehydrogenase family 7 78 IPR015590 GO:0016491
Trme23301g00001 80 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 9 80 - -
Trme23301g00001 80 SUPERFAMILY ALDH-like 5 74 IPR016161 GO:0016491
Trme23301g00001 80 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 4 80 IPR016162 GO:0016491
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme23301g00001 7 80 Aldehyde Dehydrogenase Gene Family AT1G79440 67.568 7.10e-31 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme23301g00001 K17761 - gmx:100808318 123.635