Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme23264g00001 ATGGGGAATGGAAGTCAATACAAAGAGATTCATTGGTTAGGCGAAAATTTTGTTTTAAGACATTTTTCTGGCGACGTTGAAGCTTTGGAAGGTGAGATCAAAGAGCTTTTATCACTTTCACATCCAAATATAATGGATTGTCTTTGTGGTTTTACTGATGAGGAGAAGAAAGAATGCTTTTTGTTGATGGAACTGATGAGCAAAACTCTTAGCACGCATATTAAAGAGATTTATGGTCCGAGGAAGCGAATACCGTTCTTGCTTCATGTCGCGGTAGATCTAATGCTTCAGATTGCAAGAGGAATGGAATATCTCCATTCAAAGAAAGTGTATCATGGAGAATTAAACCCTTCAAACATTCTTGTTAAGCCTAGAAGTACCTCGTCAGAAGGTTACTTGCATTCCAAGGTATCAGGGTTTGGTTTATCTTCTGTTAAGGATTTGAACCAGAAAGGGAATGCAAATCAAAATGGAACTCTCTCATTCATTTGGTACTCTCCAGAGGTACTTGAAGAGCAAGAACATTTGGGAGGCGCATTAATTTCCAAGTACACGGAGAAATCTGATGTGTATAGTTTTGGAATGGTTTGTTTTGAGCTTCTAACCGGTAAAGTCCCTTTTGAAGATAGTCATCTTCAAGGGGAGAAAATGAGCAGAAACATAAGGGCAGGAGAAAGGCCACTTTTTCCACTTAATTCGCCAAAATATGTTATCAACTTGACGAAGAAATGTTGGCATACAGATCCGAACCAACGTCCGAATTTCTCATCCATATGTAGAATTCTTCGTTATATAAAAAGATTTCTTGCATTGAATCCTGGTTACAATAAAGAAACAGACCCACCACCAATTCCACCTGTAGATTACTGTGATATAGAGTCGACACTTTTGAGGAAGTTTCCTTCTTGGGGAATTTCTGAATCATCGACGATATCTAATATTCCTTTTCAAATGTTTGCATATCGAGTCATCGAGCGAGAAAAAACGAGTACTTCCTCTAGAGATAACTCTGAATCTGGAAGTGACGCTTCAGCCTGCGGTGATGATCTTGCTACTTCTGGAGATGAGCCAATTCTATCAGTAATAGAAAAGAAACCTTTAACTCATCCTGACATTGTGAACAAAAGGATGCTTACACTGACCAGGAAATCACTAGATTCGAGGATGAAACCAGGTTAG 1179 0.3876 MGNGSQYKEIHWLGENFVLRHFSGDVEALEGEIKELLSLSHPNIMDCLCGFTDEEKKECFLLMELMSKTLSTHIKEIYGPRKRIPFLLHVAVDLMLQIARGMEYLHSKKVYHGELNPSNILVKPRSTSSEGYLHSKVSGFGLSSVKDLNQKGNANQNGTLSFIWYSPEVLEEQEHLGGALISKYTEKSDVYSFGMVCFELLTGKVPFEDSHLQGEKMSRNIRAGERPLFPLNSPKYVINLTKKCWHTDPNQRPNFSSICRILRYIKRFLALNPGYNKETDPPPIPPVDYCDIESTLLRKFPSWGISESSTISNIPFQMFAYRVIEREKTSTSSRDNSESGSDASACGDDLATSGDEPILSVIEKKPLTHPDIVNKRMLTLTRKSLDSRMKPG 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme23264g00001 392 Gene3D Transferase(Phosphotransferase) domain 1 4 273 - -
Trme23264g00001 392 FunFam Kinase family protein 1 275 - -
Trme23264g00001 392 MobiDBLite consensus disorder prediction 329 354 - -
Trme23264g00001 392 SUPERFAMILY Protein kinase-like (PK-like) 23 292 IPR011009 -
Trme23264g00001 392 PANTHER SERINE-THREONINE PROTEIN KINASE 32 267 - -
Trme23264g00001 392 Pfam Protein tyrosine and serine/threonine kinase 26 261 IPR001245 GO:0004672|GO:0006468
Trme23264g00001 392 ProSiteProfiles Protein kinase domain profile. 1 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme23264g00001 Trme-Chr23264 48 1226 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme23264g00001 32 262 MAP Kinase Kinase Kinase AT5G58950 29.060 3.01e-25 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Trme23264g00001 PK_Tyr_Ser-Thr 2.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme23264g00001 - - gmx:100813704 649.047