Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme231838g00001 ATGGTGGCGGTGAAGGTTTTAAGCGAATCAAAAGGTGACGGTGAAGATTTCATTAATGAAGTTGCGAGTATCAGCAGAACTTCACATGTCAACGTTGTTAGACTTTTGGGGTTCTGTTTGGATAGTTCTAAAAAGGCACTAATATACGATTTCATGCCTAATGGATCTCTTGAGAAGCTCATATACGAAGAGAAAAATCCATTGAAGGATGACCGCCAATTGGATTGCAAAACATTGTACGATATTGCAGTTGGTGTTGCGCGTGGACTAGAGTACTTGCACAGAGGATGCAAC 294 0.4116 MVAVKVLSESKGDGEDFINEVASISRTSHVNVVRLLGFCLDSSKKALIYDFMPNGSLEKLIYEEKNPLKDDRQLDCKTLYDIAVGVARGLEYLHRGCN 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme231838g00001 98 Gene3D Transferase(Phosphotransferase) domain 1 1 98 - -
Trme231838g00001 98 SUPERFAMILY Protein kinase-like (PK-like) 1 96 IPR011009 -
Trme231838g00001 98 ProSiteProfiles Protein kinase domain profile. 1 98 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme231838g00001 98 Pfam Protein tyrosine and serine/threonine kinase 2 95 IPR001245 GO:0004672|GO:0006468
Trme231838g00001 98 PANTHER RUST RESISTANCE KINASE LR10-RELATED 2 98 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme231838g00001 Trme-Chr231838 1 294 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme231838g00001 2 97 Receptor kinase-like Gene Family AT1G66910 64.583 2.21e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Trme231838g00001 PK_Tyr_Ser-Thr 1.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme231838g00001 - - mtr:11418569 188.348