Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme231507g00001 TTTAGGTACCAGAAGAATCAGTACAATGTGTTTTTGGTAAACCAAACAGGTTATGACAACTGTACAACAGAAGGTGCTGTTGGGAATTGGACTAGTGGCAAAGATTTCATACTATTCAACAAAACTATGAGATACTACTTCATTTGTGGTAATGGCCAATGCATGAATGGAATGAAAGTCTCAGTTTTTGTTCATCCACTTCCTTCTCCTCCTCCTTCCTCATCTGAACATCATTCAACACCAAAATCTGCTGCTCCTATGGTCTTGGAATATTTAGGACTA 282 0.383 FRYQKNQYNVFLVNQTGYDNCTTEGAVGNWTSGKDFILFNKTMRYYFICGNGQCMNGMKVSVFVHPLPSPPPSSSEHHSTPKSAAPMVLEYLGL 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme231507g00001 94 Gene3D - 1 68 IPR008972 -
Trme231507g00001 94 Pfam Plastocyanin-like domain 1 58 IPR003245 GO:0009055
Trme231507g00001 94 ProSiteProfiles Phytocyanin domain profile. 1 66 IPR003245 GO:0009055
Trme231507g00001 94 PANTHER BLUE COPPER PROTEIN 1 73 IPR039391 GO:0009055
Trme231507g00001 94 SUPERFAMILY Cupredoxins 1 65 IPR008972 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme231507g00001 1 74 Phytocyanin Superfamily AT5G15350 42.105 4.36e-18 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme231507g00001 - - pvu:PHAVU_010G162400g 124.79