Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2314g00001 ATGAACAAATTTAAAGATATATCCTACCCCAAAGTTCAATTAACACTTGGATCTACCTTCACAAAAGATATCAAGAGCCTATTGTCTAGGAAAAAAATTATAACAGAGGTCATAGAGAAACTCAAGGATGATCAAGTCAAAATGATTAGCATTTGTGGGATGGGTGGAGTGGGAAAAACCACAATGGTGAAAGAACTCATCAAAATAATAGAAAAAAGTAAGCTATTTGATGAAGTTGCGATGGCGGTTGTATCCCAAGATATAAATTATGAGAAGATCCAAATTCAAATTGCTGAGGGTTTGAGTATGGAAATGAGAAAGGACAGCGAGCAAGCAAGAGCAATGCAATTACTGGAGAGACTGGGTGAAGGTAAAAAGATCCTAATTGTACTTGATGATGTATGGGATGTTCTTGATTTTGAGAGTATTGGAATTCCTTATCTAGAACATGAGAAATCTTGCAAAATATTGTTCACATCACGTGATGAAAAAGTGTGCCAAAATATGGGATGCAAAGTGAATTTTTCAGTCTCTGTGTTACAGAAGGATGAAGCTTGGTATCTATTTCGAGAGATGGCAGGAGAAATTGTAGATAGTCATGATATCAATCCAATAGCAAGAGATGTTGCAAAGGAATGTGCTGGCTTACCCCTTGCAATTGCGATAGTTGGAAGAGCATTAAACAATGAAGGGAAGTCTGCATGGGAAGACGCACTTAGTCAATTAAGAAATTTTCAATCATCTTCTTTCTTGGATGTTGAAAAATTTGTCTACCCCCACGTTGAGCTTAGTTTATAA 798 0.3647 MNKFKDISYPKVQLTLGSTFTKDIKSLLSRKKIITEVIEKLKDDQVKMISICGMGGVGKTTMVKELIKIIEKSKLFDEVAMAVVSQDINYEKIQIQIAEGLSMEMRKDSEQARAMQLLERLGEGKKILIVLDDVWDVLDFESIGIPYLEHEKSCKILFTSRDEKVCQNMGCKVNFSVSVLQKDEAWYLFREMAGEIVDSHDINPIARDVAKECAGLPLAIAIVGRALNNEGKSAWEDALSQLRNFQSSSFLDVEKFVYPHVELSL 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2314g00001 265 Pfam NB-ARC domain 31 248 IPR002182 GO:0043531
Trme2314g00001 265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 260 IPR027417 -
Trme2314g00001 265 PRINTS Disease resistance protein signature 121 135 - -
Trme2314g00001 265 PRINTS Disease resistance protein signature 213 227 - -
Trme2314g00001 265 PRINTS Disease resistance protein signature 48 63 - -
Trme2314g00001 265 Gene3D - 180 265 IPR042197 -
Trme2314g00001 265 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 6 264 - -
Trme2314g00001 265 FunFam Probable disease resistance protein At1g61300 11 174 - -
Trme2314g00001 265 Coils Coil 24 44 - -
Trme2314g00001 265 Gene3D - 9 177 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme2314g00001 Trme-Chr2314 318 1115 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme2314g00001 38 258 WRKY Transcription Factor Family AT5G45050 27.826 3.30e-09 55.5