Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme231139g00001 ATGCATAAAGGGGGCGTTGTTTTGGAAAACATAAAGGGTGATATAGAACTTAAAGATGTTTACTTCAGATACCCTGCAAGGCCAGATATGCAGATATTTGCTGGATTCTCATTGTTTGTTCCGAATGGAACAACTACTGCTTTGGTTGGTCAAAGTGGAAGTGGAAAGTCCACCGTGATCAGTTTATTGGAAAGATTCTATTACCCTGATGGTGGAGAAGTGCTTATAGACGGTGTTAATTTGAAGAACTTGCAACTTAAATGGATAAGGGAACATATTGGGTTG 285 0.393 MHKGGVVLENIKGDIELKDVYFRYPARPDMQIFAGFSLFVPNGTTTALVGQSGSGKSTVISLLERFYYPDGGEVLIDGVNLKNLQLKWIREHIGL 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme231139g00001 95 Gene3D - 5 95 IPR027417 -
Trme231139g00001 95 Pfam ABC transporter 36 94 IPR003439 GO:0005524
Trme231139g00001 95 PANTHER ABC TRANSPORTER B FAMILY 3 95 IPR039421 -
Trme231139g00001 95 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 94 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme231139g00001 Trme-Chr231139 55 339 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme231139g00001 3 95 Calmodulin-binding Proteins AT2G36910 58.065 3.29e-33 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme231139g00001 K05658 - gmx:100801771 159.458