Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme230893g00001 CAAAGACTCTACAACCAAACTGGAAATGGCAAGTCAGATTTCACTCTTGACCAAAACTATGCAGCTCAATTGCGCACTCGGTGTCCAAGATCTGGTGGGGATCAAAATCTATTTGTCCTAGACTTTGTCACGCCGGTAAAATTCGACAACAACTACTACAARAATTTATTGGCCAACAAGGGTCTGTTAAGTTCTGATGAAATTCTGTTGACAAAGAATCAAGTATCTGCAGCTTTAGTGAAAACTTATGCAGAAAGAAATGATCTTTTCTTTGAACAATTTGCCAAGTCTATGGTTAAGATGGGAAACATTACTCCATTAACAGGATCAAGGGGAGAAATCAGAAAACGCTGCAGAAAGATTAACTCTTGA 372 0.3844 QRLYNQTGNGKSDFTLDQNYAAQLRTRCPRSGGDQNLFVLDFVTPVKFDNNYYKNLLANKGLLSSDEILLTKNQVSAALVKTYAERNDLFFEQFAKSMVKMGNITPLTGSRGEIRKRCRKINS 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme230893g00001 123 PANTHER PEROXIDASE 72-RELATED 1 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme230893g00001 123 Gene3D Peroxidase, domain 2 1 101 - -
Trme230893g00001 123 FunFam Peroxidase 1 101 - -
Trme230893g00001 123 ProSiteProfiles Plant heme peroxidase family profile. 1 122 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme230893g00001 123 PRINTS Plant peroxidase signature 55 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme230893g00001 123 PRINTS Plant peroxidase signature 39 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme230893g00001 123 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme230893g00001 123 SUPERFAMILY Heme-dependent peroxidases 1 122 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme230893g00001 123 Gene3D - 102 122 - -
Trme230893g00001 123 Pfam Peroxidase 2 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme230893g00001 Trme-Chr230893 2 373 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme230893g00001 1 122 Peroxidase AT5G66390 71.311 1.46e-60 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme230893g00001 K00430 - gmx:102667724 226.483