Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme230289g00001 TCTGCTGACATATGGAGCGTGGGATGTACAGTGATTGAGATGGCCACGGGAAAGCCTCCTTGGAGCCAGCAATACCAACAAGAAGTAACTTATATTTTGACTTCTTTAATTCTTTTTGAGGTGCTCTGA 129 0.4341 SADIWSVGCTVIEMATGKPPWSQQYQQEVTYILTSLILFEVL 42
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme230289g00001 42 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 28 - -
Trme230289g00001 42 Gene3D Transferase(Phosphotransferase) domain 1 1 41 - -
Trme230289g00001 42 ProSiteProfiles Protein kinase domain profile. 1 42 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme230289g00001 42 SUPERFAMILY Protein kinase-like (PK-like) 2 36 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme230289g00001 Trme-Chr230289 216 344 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme230289g00001 1 27 MAP Kinase Kinase Kinase AT3G06030 96.296 2.02e-15 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Trme230289g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme230289g00001 K20606 - gmx:100807537 66.2402