Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme230041g00001 ATGTGTGTCATAGTAAGAAGGGAGGGGCATCACCATCCTCATTCCTCAGTGGAAATGGAGAGGTGGCTAATGTCACCCTTCGCGAGAGGATTAGAAGTTGTCTTAGCAAGCACTACAGGACAAATGATTGGGGGGAGTGTTATGCCCCCTCTAGTGGCTTCGGGTCCAGTGGTGTTGGTGGTTGTTTCCTTTGCAAACAGTGCAGATGGACAG 213 0.5023 MCVIVRREGHHHPHSSVEMERWLMSPFARGLEVVLASTTGQMIGGSVMPPLVASGPVVLVVVSFANSADGQ 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme230041g00001 71 SUPERFAMILY AF0104/ALDC/Ptd012-like 29 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme230041g00001 Trme-Chr230041 9 313 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme230041g00001 30 68 AT-hook Motif Nuclear Localized (AHL) Family AT3G60870 56.410 8.38e-08 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme230041g00001 - K09267 tpra:123911212 62.7734