Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme22990g00001 CTTCAAGCAAGAGATCTGCTTCAGCATCTTTGGACGGGGCCAATATCAAATGCATCTCTTGATGTTTTCCAAGGTGGTCGATCTGTTGAGGTCCGTGCAGTTGGTGTGTCAAAGGGAGCAGCTATCGACCGTATCCTGGGAGAGATAGTTCATAACAAAGGCATGAAGGAACCAATTGATTACGTCCTATGCATTGGGCACTTTCTATCAAAGGATGAAGATGTCTATAAATTTTTTGAGCCAGAGCTCCCTACGGAATCATCTCCAATGGCAAAAGCTATGCTATCCAATTCTTACAGGCCATCATCTCTGCCAAGATTTTCATCCAGCAAAAGTGGCTCGAAAGCATCTCACTATAAGAAGCAACGTTCACTGTCAAATCTAGAAAGGAGAGCCATTGAGCGCACAACTAGTGATCCTTGGAGACCACCAGGCCGTGATAGAATGTCGCTATATGAGGGTTCATCGGTTCTTGATCTTAAAGGTGATAATTACTTCTCTTGTGCTGTTTCACGAAAGAGATCAAGTGCCCGCTACCTTCTTAAAACCTCACATGATATTGTCAATCTCTTAAGTGACCTGGCAGAT 588 0.4388 LQARDLLQHLWTGPISNASLDVFQGGRSVEVRAVGVSKGAAIDRILGEIVHNKGMKEPIDYVLCIGHFLSKDEDVYKFFEPELPTESSPMAKAMLSNSYRPSSLPRFSSSKSGSKASHYKKQRSLSNLERRAIERTTSDPWRPPGRDRMSLYEGSSVLDLKGDNYFSCAVSRKRSSARYLLKTSHDIVNLLSDLAD 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme22990g00001 196 MobiDBLite consensus disorder prediction 99 147 - -
Trme22990g00001 196 Pfam Trehalose-phosphatase 2 92 IPR003337 GO:0003824|GO:0005992
Trme22990g00001 196 MobiDBLite consensus disorder prediction 122 142 - -
Trme22990g00001 196 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 195 IPR001830 GO:0003824|GO:0005992
Trme22990g00001 196 MobiDBLite consensus disorder prediction 99 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme22990g00001 Trme-Chr22990 1 1298 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme22990g00001 1 196 Trehalose Biosynthesis Gene Families AT1G78580 54.338 1.45e-60 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme22990g00001 K16055 - gmx:100816642 282.722