Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme22963g00001 GGGGAAGTTTATAAGCTATCAAACTTTGTTGTTGCTCCAGTTGTTGGATCTTATCGTCCAACTATGCATCCTTTCAAATTGATTTTTCAAAAGAAGACCAAAGTTCAGAATGTTGAGAAATCTGATATTCCTATATTGGGATTATCTTTCACTGATCTTGCTGAAGTGTCTAGCTACTCTGATGATTATGATTACCTAATAGATGTCATTGGTTTAATGTCTGGTATATCAAATGAGCTGGAGTATATTCGTGATGGCAAAGTCACCAAGATGGTTGTTCTTGAACTTACAGACAATAGTGGTAAATGTGAATGTGCTTTGTTTGGTGATTATGTTGATGAGTTGCAAAGATTAATTGGTAAATCTCCTTCTGGTGTCCACGTTGTTGCAATACAGTTTGCCAAAGTTAAAATATTTAGAGGGAAAGCTTCCATTCAAAATGTTATGAATACCACAAGGATTTTTGTAGACCCTGAGATTAAAGAGGCATCTGAGTTAAGAAAGGGGTTAGCCATTGTTGGTAATGACTCAACCCCTGTGATTACGACAACTGGTCCTCGTCCTAGGCCTTCTTTTGTAGAGGATTTCGTTATGTCAAAATACAAAAAAAGTATTGAGCAAATAAATTCTATGAATGAGCATGAAGTGTTTGTCGTTTCTGCTGTAATTGAAAGTCTGGTTGATGGTGAAAGTTGGTGGTATCCTGCTTGCAATTGCCACAGGGCCGTTATTCCTGATTCTGGTGCTTTTTATTGCAAGGGTTGTGAGAAGCATGTCTATGTGACAATTCCAAGGTTACCACCAAATTAA 810 0.3728 GEVYKLSNFVVAPVVGSYRPTMHPFKLIFQKKTKVQNVEKSDIPILGLSFTDLAEVSSYSDDYDYLIDVIGLMSGISNELEYIRDGKVTKMVVLELTDNSGKCECALFGDYVDELQRLIGKSPSGVHVVAIQFAKVKIFRGKASIQNVMNTTRIFVDPEIKEASELRKGLAIVGNDSTPVITTTGPRPRPSFVEDFVMSKYKKSIEQINSMNEHEVFVVSAVIESLVDGESWWYPACNCHRAVIPDSGAFYCKGCEKHVYVTIPRLPPN 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme22963g00001 269 Pfam Domain of unknown function DUF223 2 41 IPR003871 -
Trme22963g00001 269 SUPERFAMILY Nucleic acid-binding proteins 48 170 IPR012340 -
Trme22963g00001 269 Gene3D - 41 176 IPR012340 -
Trme22963g00001 269 CDD RPA1_DBD_B_like 68 168 - -
Trme22963g00001 269 Gene3D - 1 40 IPR012340 -
Trme22963g00001 269 SUPERFAMILY Nucleic acid-binding proteins 203 259 IPR012340 -
Trme22963g00001 269 Gene3D - 197 266 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme22963g00001 Trme-Chr22963 1 1172 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme22963g00001 1 258 Core DNA Replication Machinery Family AT2G06510 22.744 1.01e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme22963g00001 - - tpra:123908197 356.681