Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme22939g00001 CAATCCTTGTATCCCAACATTGATGGCCTCCCTCAATTGATAGCAACCATTAAGGTGTATGTCGCTTCTCTAACAACAGTGGGCGAAGAATTAGATTGGTATGCGATCCTCGGTGCACAACGCGTGGATGATGATGAAACGATTCGGAAATGTTATAAGAACATGGCTCTTATTCTGCACCCTGATAAAAACAAGTCAGTAGGTGCGGAGGGCGCATTTAATCTTGTCTCACAGGCTTGGACTATATTATCTGATAAAGCTAAGAGAGCCACCTTTGATAAAAAGTATCGCTTGTGGGATTTGTTTAACGATATCCCTGGTGGGGTACCTCCTATACTTGCTAGTCGATACGGTTTGTCGAATACCGCTAACCCTGCTAGGAGACCTCCTGTACCCGCTAGTCAGAACGGTTTGTCTAATAATGCTAACCCTGCTGGGAGACCTCCTGTACCCGCTAGTCAGAACGGTTTGTCTAATACCGCTAACCCTGCTGGGAGACCTCCTGTACCCGCTAATCAGAACGGTTTGTCTAATACCGCTAACCCTGCTGGGAGACCTCCTGTACCTGCTAGTCAGAATGGTTTCTTTAATGCTGCAAACCAGAAGGACAGAGATCATATGAGTGCTGCTCATACCAATTCTTCTTCAAGACCCCCCTTAAAAACACCGACATTTTGGACCTTGTGCAGTTTATGCAGGACACATTACGAGTACCTTGCTGTCTATAAAGACTGCAATCTTGCCTGCACCACCTGCAAAAAGCCATTTTTAGCTTCTGAGGTACCACCCCCATCTGTATACAAAAATGTTTCATCCGCTTCAAGACCTTCTCAGATGATGCAACACAAATTCAACTCAACTGGAGTGGATAGAAACTGTCATGTTTCAAGTAGGACACAGATGTCTGCTGTCAACTCATCGGTTGGTTCTATGCCTGGTGGCATTTCTGGTGGAGCTCTTGGTTCTTTTACGAGGCCATCTGCGAATTTGAAGAGAAAGTATGAAGATTCGGCACCTGTCATGAGGGAGGAGGTGCATTTTGGGAAAACTCATGCTGTTGAGAGAACTGCTGCTGGTTCAGATTTTCAGTNTTGTCAGAAAAAAATGTGCACAGGTGAACATAAAGTTGATAGTGATAGACGAGACAAGGAAACTGAGATGGCATTAAAAAAAGGAATAAATTTGACCAATGGGTTTGGGTCTCTGAAGAATAGTTTTGATGCTGGAAAGGTTAGTGCTGCCGGAAATTTCAGACGAAATGGTATTAGGGACATATCTCAGCAGCAAATGAGGAACAT 1298 0.4438 QSLYPNIDGLPQLIATIKVYVASLTTVGEELDWYAILGAQRVDDDETIRKCYKNMALILHPDKNKSVGAEGAFNLVSQAWTILSDKAKRATFDKKYRLWDLFNDIPGGVPPILASRYGLSNTANPARRPPVPASQNGLSNNANPAGRPPVPASQNGLSNTANPAGRPPVPANQNGLSNTANPAGRPPVPASQNGFFNAANQKDRDHMSAAHTNSSSRPPLKTPTFWTLCSLCRTHYEYLAVYKDCNLACTTCKKPFLASEVPPPSVYKNVSSASRPSQMMQHKFNSTGVDRNCHVSSRTQMSAVNSSVGSMPGGISGGALGSFTRPSANLKRKYEDSAPVMREEVHFGKTHAVERTAAGSDFQXCQKKMCTGEHKVDSDRRDKETEMALKKGINLTNGFGSLKNSFDAGKVSAAGNFRRNGIRDISQQQMRN 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme22939g00001 432 Gene3D DnaJ domain 29 98 IPR036869 -
Trme22939g00001 432 PANTHER BNAC03G44070D PROTEIN 1 377 - -
Trme22939g00001 432 ProSiteProfiles dnaJ domain profile. 32 96 IPR001623 -
Trme22939g00001 432 PRINTS DnaJ domain signature 68 88 IPR001623 -
Trme22939g00001 432 PRINTS DnaJ domain signature 52 67 IPR001623 -
Trme22939g00001 432 PRINTS DnaJ domain signature 34 52 IPR001623 -
Trme22939g00001 432 SMART dnaj_3 31 88 IPR001623 -
Trme22939g00001 432 Pfam DnaJ domain 32 93 IPR001623 -
Trme22939g00001 432 CDD DnaJ 32 85 IPR001623 -
Trme22939g00001 432 MobiDBLite consensus disorder prediction 113 219 - -
Trme22939g00001 432 MobiDBLite consensus disorder prediction 117 186 - -
Trme22939g00001 432 SUPERFAMILY Chaperone J-domain 21 97 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme22939g00001 Trme-Chr22939 2 1299 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme22939g00001 1 98 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.654 1.06e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme22939g00001 - - tpra:123918026 835.869