Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme22929g00001 TTAATGGTTCAAGGGCTTCCGGGAACTACATGTTGTAGAGGACCATTTGATGTTATCCGTCGAGTAGTGCATGCTGAGGGTTTTCGCGGCTTGTATAGAGGTTTTGGATTAACAGCTGTAACGCAATCTCCAGCATCTGCACTTTGGTGGGGATCATATGGTGCAGCACAACACATAATTTGGAGGAGTTTAGGCTACAAAGATGATACGGAGAAGAAGCCTTCACACGTGGAAATGGTGACAGTTCAGGCTACTGCCGGGATGGTGGCTGGTGCTTGTTCCTCTGTCATCACTACTCCCATAGATACTGTAAAAACACGACTTCAGAGACAGAGAATTGCAAAGCTTGATTTTCGCATGCCTAGCTTGTGGTATGGGATAGCAAACGGATAG 393 0.4631 LMVQGLPGTTCCRGPFDVIRRVVHAEGFRGLYRGFGLTAVTQSPASALWWGSYGAAQHIIWRSLGYKDDTEKKPSHVEMVTVQATAGMVAGACSSVITTPIDTVKTRLQRQRIAKLDFRMPSLWYGIANG 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme22929g00001 130 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 59 IPR018108 -
Trme22929g00001 130 Pfam Mitochondrial carrier protein 82 112 IPR018108 -
Trme22929g00001 130 Pfam Mitochondrial carrier protein 14 61 IPR018108 -
Trme22929g00001 130 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 111 - -
Trme22929g00001 130 SUPERFAMILY Mitochondrial carrier 2 114 IPR023395 -
Trme22929g00001 130 Gene3D Mitochondrial carrier domain 1 128 IPR023395 -
Trme22929g00001 130 ProSiteProfiles Solute carrier (Solcar) repeat profile. 78 130 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme22929g00001 Trme-Chr22929 53 1271 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme22929g00001 1 109 Chloroplast and Mitochondria Gene Families AT5G15640 53.153 8.08e-36 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme22929g00001 K15121 - jre:109001167 207.608