Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2287g00001 ATGATGGATCACCAATCTGGCCAGGGATTTGATTCATATGGTAGTGACCTTAACATGATAGCAGAAACCAGTGAGAAACATGACAAAGTAGATGACGACATTTCAAACAATTTAGAATTATGTGCAGGTGAAGATGAAAGGTTTGTTGAACAACCTGTGGCAGATTCAGACACATTAGAACCATTCATAGGCATGGAGTTCAACTCAAGGGAGGAAGCCAGAGAGTTCTACAATGCCTATGGTAGACGGATTGGATTTACAGTACGAGTACACCATAACCGCCGTTCACGAATTAATAAAGAGGTTATTGGTCAAGATTTTGTTTGCTCAAAAGAAGGCTTTCGAGCAAAGAAGTATGTGCACAGAAAAGATAGAGTGCTCCCTCCTCCACCACCTTCCCGAGAAGGTTGTCAAGCCATGGTAAGGATGACTTTACAAGATGGAGGGAAGTGGGTTGTCACCAAATTTGAGAAGGAGCATACACATAAACTGATGAGTCCTAGTGAAGTTCCATGGCGAAGATCTGAGAAGCACTTGATTAGTGAGGATGAGAAAGATAGGAGAATCCGTGCGCTATCACTTGAGTTGTACAACGAAAGGCAAAAGTACAAACGGCGTTGTGCAGCATATGAAGAACAGATAAATATGATTCTGAATGATGTGGAAAGGCACACAGAACACATCTCTAAAAAAGTTGCTGATGTAGTCCGAAATATAAGAGAGATCGAGGAAGAAAAATCAGAGTCAAATGGAAGGTAA 759 0.4137 MMDHQSGQGFDSYGSDLNMIAETSEKHDKVDDDISNNLELCAGEDERFVEQPVADSDTLEPFIGMEFNSREEAREFYNAYGRRIGFTVRVHHNRRSRINKEVIGQDFVCSKEGFRAKKYVHRKDRVLPPPPPSREGCQAMVRMTLQDGGKWVVTKFEKEHTHKLMSPSEVPWRRSEKHLISEDEKDRRIRALSLELYNERQKYKRRCAAYEEQINMILNDVERHTEHISKKVADVVRNIREIEEEKSESNGR 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2287g00001 252 Coils Coil 193 220 - -
Trme2287g00001 252 Pfam FAR1 DNA-binding domain 75 165 IPR004330 -
Trme2287g00001 252 Coils Coil 239 252 - -
Trme2287g00001 252 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 24 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme2287g00001 Trme-Chr2287 1659 2617 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trme2287g00001 FAR1 4.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme2287g00001 - - gmx:100810283 413.305