Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme22876g00001 ATGGCGCAAACATCAAGCTCTCGAGATCTTGAAAAAGTTGAAGAGTCTCCAAGAAGACTTGGGAAGGTCAAAACATCACTCACAACTTTTCCTTCTTCGGCTGAAATTGTATCTGAACCGCTAGGAGTTGTCTTGGTCATCTCTGCATGGAACTATCCATTTTTGCTATCACTTGATCCAATCATTGGAGCTATTGCAGCTGGTAATGTTGTGGTCTTAAAACCATCAGAACTTGCTCCAGCCACATCATCATTGCTGGAAAAACTATTAGGGGAATACATGGATAACTCATCTATAAGAGTTGTTGAGGGAGCAGTTTATGAAACATCTGCATTATTGCAAGCGATGTGA 351 0.4103 MAQTSSSRDLEKVEESPRRLGKVKTSLTTFPSSAEIVSEPLGVVLVISAWNYPFLLSLDPIIGAIAAGNVVVLKPSELAPATSSLLEKLLGEYMDNSSIRVVEGAVYETSALLQAM 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme22876g00001 116 MobiDBLite consensus disorder prediction 1 21 - -
Trme22876g00001 116 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 3 116 IPR016162 GO:0016491
Trme22876g00001 116 PANTHER ALDEHYDE DEHYDROGENASE 22 114 IPR012394 GO:0006081
Trme22876g00001 116 Pfam Aldehyde dehydrogenase family 32 111 IPR015590 GO:0016491
Trme22876g00001 116 SUPERFAMILY ALDH-like 31 113 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme22876g00001 Trme-Chr22876 392 1134 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme22876g00001 22 114 Aldehyde Dehydrogenase Gene Family AT1G44170 81.720 1.41e-46 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme22876g00001 K00128 - egr:104450515 161.384