Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme228545g00001 GTTAATAGGGAGGCTTTTCTTGGAAATTTGGATCAGAACAGTTTATTAAGCACTCTCGACTCCTTTTCTGGTGGAGGTATTGGTCGACTTGGGCTATGCTCTCTTGGTATTGTTCCCTTCATCAATGCACAGATTGTTTTTCAGCTTCTTGCTCAAGTATATCCCAAGTTGCAAGATCTTCAGAAAAGAGAAGGTGAGGCTGGAAGAAAGAAAATTCTTCAATACACTCGATATGCTTCAGTTGGATTTGCCATTGTACAGGTCAGGAATTACCGCATTTAG 282 0.4078 VNREAFLGNLDQNSLLSTLDSFSGGGIGRLGLCSLGIVPFINAQIVFQLLAQVYPKLQDLQKREGEAGRKKILQYTRYASVGFAIVQVRNYRI 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme228545g00001 93 Pfam SecY 32 87 IPR002208 GO:0015031|GO:0016020
Trme228545g00001 93 ProSitePatterns Protein secY signature 1. 31 50 IPR030659 -
Trme228545g00001 93 PRINTS Preprotein translocase SecY subunit signature 30 50 - -
Trme228545g00001 93 PRINTS Preprotein translocase SecY subunit signature 72 93 - -
Trme228545g00001 93 SUPERFAMILY Preprotein translocase SecY subunit 9 88 IPR023201 -
Trme228545g00001 93 Gene3D SecY subunit domain 1 91 IPR023201 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme228545g00001 1 87 Chloroplast and Mitochondria Gene Families AT2G18710 94.253 3.95e-53 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme228545g00001 K10956 - tcc:18589118 169.474