Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme22850g00001 GAATACAATGTGCTTGACTATGAGGAGAAAGTAGTAGATGGTTTTTATGATGTATATGGACTCTACAATGACCCGGCAATGCAAGGAAAGATGCCATCTCTAGCAGATCTTGAAACAAACCCTGGCAGTTCTAGCTTTGAAGTGGTCATAGTTAATCGAACAATTGATCCTGCCCTCGAAGAGCTGGTGCAAATTGCACAATGTATATCATTGGACTGCCCTGTCACCGAGATTGGTATTTTGGTACAAAGGCTTGCCGAACTTGTTACAAGCCATATGGGTGGCCCTGTAAAGGATGCTAATATTATATTAGCAAGATGGACAGAAAGAAGTACAGAGTTAAGGACATCTCTTCACACAAGCGTATTACCGCTTGGGTCCTTAGATATTGGGCTCTCTAGGCATCGTGCTTTACTTTTCAAGATATTAGCAGACAACATTAAGATGCCTTGTAGACTGGTTAAAGGTAGTCATTACACTGGTGTTGAGGATGATGCTGTCAACATTATAAAGTTGGAGGATGAAAGGTTAAGGCTTTT 539 0.4119 EYNVLDYEEKVVDGFYDVYGLYNDPAMQGKMPSLADLETNPGSSSFEVVIVNRTIDPALEELVQIAQCISLDCPVTEIGILVQRLAELVTSHMGGPVKDANIILARWTERSTELRTSLHTSVLPLGSLDIGLSRHRALLFKILADNIKMPCRLVKGSHYTGVEDDAVNIIKLEDERLRL 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme22850g00001 179 Pfam Ethylene-responsive protein kinase Le-CTR1 2 176 - -
Trme22850g00001 179 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 3 3 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme22850g00001 Trme-Chr22850 218 1295 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme22850g00001 1 176 MAP Kinase Kinase Kinase AT1G08720 65.909 4.80e-81 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme22850g00001 - - aprc:113870732 323.939