Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme228338g00001 CTATGGCTCGCACTTTGTGTTGCCACGAACAGCAGTGCATGGTTTGGAACGGCTGTGCTTGTTACCAACATGAGAAACTTTCCTCTTAGTAGAGGCACAATCTCTGGCATTCTCAAAGGCTATGTAGGAATAAGCGCTTCGGCCTTGTACTCCTCCTTCGGGTGA 165 0.4909 LWLALCVATNSSAWFGTAVLVTNMRNFPLSRGTISGILKGYVGISASALYSSFG 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme228338g00001 54 Pfam Nodulin-like 1 49 IPR010658 -
Trme228338g00001 54 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme228338g00001 Trme-Chr228338 71 345 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme228338g00001 1 48 Nodulin-like Gene Family AT1G80530 68.750 2.06e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme228338g00001 - - egr:104450606 94.3597