Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme22807g00001 ATGGAACCGGCATCTGCTGTAACTCCTCCAGCTTCTAACACTGAACACTCCTCCACCAAAGTGTCTGCTGAAAATAGCAATGCACGTGATCCACCGTCCTTGTCACCAACTTCTGGTATATCTTCCTGGGAAAGAAATCCGAGGCTCGGGGCAGCAGATCAGAACTCACAGACTGAGAACAGTGGTATGTCTGCATTTGCTGTAACTCCAGCATTGATGGAACCGGCATCTGCTGTAACGCCTCCAGCTTCTAACACTGAACATTCCTCCACCAAAGTATCTGCTGAAAATAGCAATGCACGTGATTCACCGTCCTTCTCACCAACTTCTGGTATATCTTCCTGGGCACGAAATCTGAGGCTCGGGGCAGCAGATCAGAACTCCCAGACTGAGAACAGTGGTATTTCTGCATTTGCTCGCCTGGCAAGCGGGATTGGACTACGAAGTCCCTCAAATGAGACTGCTCCAGGCAACTCAGGAGCTGAGCAATCTAATTTAATTGAATCATTCACCAAAGGGTTGGTGGACTCTTCTAAGAGTGCAGTAAAGGCGATGCAGACCAAAGCACGGCATATTGTCTCTCAAAATAAACGCAGATACCAGGTCAGTTGA 612 0.4837 MEPASAVTPPASNTEHSSTKVSAENSNARDPPSLSPTSGISSWERNPRLGAADQNSQTENSGMSAFAVTPALMEPASAVTPPASNTEHSSTKVSAENSNARDSPSFSPTSGISSWARNLRLGAADQNSQTENSGISAFARLASGIGLRSPSNETAPGNSGAEQSNLIESFTKGLVDSSKSAVKAMQTKARHIVSQNKRRYQVS 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme22807g00001 203 MobiDBLite consensus disorder prediction 1 113 - -
Trme22807g00001 203 MobiDBLite consensus disorder prediction 7 65 - -
Trme22807g00001 203 MobiDBLite consensus disorder prediction 79 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme22807g00001 Trme-Chr22807 598 1209 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme22807g00001 75 201 Protein tyrosine phosphatase (PTP) family AT3G19420 46.809 8.93e-24 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme22807g00001 K01110 - gmx:100801622 176.792