Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme22782g00001 TTATGGTTTCTTAGTGGCATCCTCACTGTATTCTTTTGTGGGATTGTAATGTCTCATTATACATGGCATAATGTGACTGAGAGTTCAAGAATCACTACCAAACCTGGAACATCTGTTAGTGTGAGTTCAGTATTATTAGCTCTAGTACTCGTTGGAAGAGCTGCATTTGTTTTCCCCTTATCCTTCTTAATCAACTTGACTAAAAAGTCAGAAAATGATAAACTAAGCTTCAGCATGCAGGTGATCATTTGGTGGGCTGGTCTTATGAGAGGTGCTGTTTCAATGGCACTTGCCTATAATGAGGTACGACCGTACAAGCACCTTCCTCATCAAGAGTTGACTTATCATTTGTTACATTGCAAAGCCTTGTTTGGATAA 378 0.3915 LWFLSGILTVFFCGIVMSHYTWHNVTESSRITTKPGTSVSVSSVLLALVLVGRAAFVFPLSFLINLTKKSENDKLSFSMQVIIWWAGLMRGAVSMALAYNEVRPYKHLPHQELTYHLLHCKALFG 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme22782g00001 125 Pfam Sodium/hydrogen exchanger family 44 99 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trme22782g00001 125 PANTHER SODIUM/HYDROGEN EXCHANGER 4 104 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme22782g00001 Trme-Chr22782 94 848 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme22782g00001 1 107 Antiporters AT5G27150 58.156 9.29e-48 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme22782g00001 - - tpra:123890854 172.555