Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme227753g00001 GGAGATTCTGCTGAAGGAGTTGAGAAAACTAAGGAAGCTATCAAGCTTCTTAAGCATGTTGGAGCTTTCCCCGACGCCGAGAAAGCAAAGAACAGCCACGGAATCCGTCCTGGAAAAGGTAAAATGCGTAACCGTCGCTACATTTCCCGCAAGGGTCCATTGATCGTTTATGGAACCGAAGGAGCGAAAGCTGTTAAGGCGTTCCGGAACATTCCTGGTGTTGAGATCACCAATGTTGAAAGGTTGAATCTTTTGAAGCTTGCACCTGGTGGTCATCTTGGTAGGTTTGTGATTTGGACTAAAACTGCTTTTGAGAAATTGGATTCCATCTACGGGTCTTTTGACAAGGCTTCTGAGAAGAAAAAGGGTTATGTTCTTCCTAGGGCTAAGATGGTGAACTCTGA 404 0.453 GDSAEGVEKTKEAIKLLKHVGAFPDAEKAKNSHGIRPGKGKMRNRRYISRKGPLIVYGTEGAKAVKAFRNIPGVEITNVERLNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFDKASEKKKGYVLPRAKMVNS 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme227753g00001 134 Pfam Ribosomal protein L4/L1 family 7 108 IPR002136 GO:0003735|GO:0005840|GO:0006412
Trme227753g00001 134 SUPERFAMILY Ribosomal protein L4 3 109 IPR023574 GO:0003735|GO:0005840|GO:0006412
Trme227753g00001 134 PANTHER 60S RIBOSOMAL PROTEIN L4 2 133 IPR045240 -
Trme227753g00001 134 Gene3D - 1 134 IPR023574 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme227753g00001 Trme-Chr227753 1 404 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme227753g00001 1 134 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 83.582 3.76e-78 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme227753g00001 K02930 - qsa:O6P43_006714 246.128