Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme227671g00001 ATTCGCAAGCTTGTGAGGCAGTCCAAATGCCTTCAAGATAAAATGACGGCTAAGGAAAGTGCAACCTGGCTTGCAATTGTCAATCAAGAGGAGGCGATAGCGAGAGAGCTTTATCCTGATTATATCCCCCCATTTACATCACTTGGAGCAAATGGATCTTATGCCACCAATGACGGCAGCGAGTACGATGTTTATGGGGGAGACGATGGGCCAAATTTTGAAGTGGAAGAACGGAAACCCGAGACTCTTCTTCATGCATCCAACATCGGGATCATGGAGAGAATGACAGGCGTAAGACTGCCAATTCAGCAGCCTTCTTTCGCAGTGAATGGACAGGCTGTAACAAACATGGATTTCATGCGGAAGAGGAAGATCTCTGGTGAATTTAACATGATGATGGATC 403 0.4615 IRKLVRQSKCLQDKMTAKESATWLAIVNQEEAIARELYPDYIPPFTSLGANGSYATNDGSEYDVYGGDDGPNFEVEERKPETLLHASNIGIMERMTGVRLPIQQPSFAVNGQAVTNMDFMRKRKISGEFNMMMD 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme227671g00001 134 SUPERFAMILY DNA-binding domain of EIN3-like 1 34 IPR023278 GO:0003700|GO:0005634
Trme227671g00001 134 Gene3D - 1 42 IPR023278 GO:0003700|GO:0005634
Trme227671g00001 134 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 1 126 IPR006957 GO:0003700|GO:0005634
Trme227671g00001 134 Pfam Ethylene insensitive 3 1 31 IPR047091 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme227671g00001 Trme-Chr227671 2 404 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme227671g00001 1 134 EIL Transcription Factor Family AT3G20770 51.493 1.03e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Trme227671g00001 EIN3 2.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme227671g00001 K14514 - gmx:100775868 193.356