Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme227226g00001 ACAAAGGAGAAGATACACAACATTGCATCGGGGACAGCTATAATCAACAAAAGAATCTCTGCAAAAAAGGTGCTCATTGTACTTGATGATGTGACAAAAGTACAGCAAGTTAAAGCTCTATGTGGAAATCGTAAATGTTTAGGTTTGGGAAGTGTACTGATTGTTACAACCAGGGACGCACACATACTTAAGTTACTTGAAGTTGACTGTATCTGTACAGCGGAAGAAATGAATGATACCGAGTCCCTTGAGCTTTTTAGTTGGCATGCTTTTAGAAACGCGACTCCAAGAGCAAACTTCAGTGAACTCTCAAAAAGTGTTGTTAATTACTGTGGAGGATTACCCTTTATCTGA 354 0.3898 TKEKIHNIASGTAIINKRISAKKVLIVLDDVTKVQQVKALCGNRKCLGLGSVLIVTTRDAHILKLLEVDCICTAEEMNDTESLELFSWHAFRNATPRANFSELSKSVVNYCGGLPFI 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme227226g00001 117 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 116 IPR027417 -
Trme227226g00001 117 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 115 IPR044974 GO:0006952
Trme227226g00001 117 Pfam NB-ARC domain 15 116 IPR002182 GO:0043531
Trme227226g00001 117 Gene3D - 1 71 IPR027417 -
Trme227226g00001 117 Gene3D - 76 117 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme227226g00001 Trme-Chr227226 3 356 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme227226g00001 9 116 WRKY Transcription Factor Family AT5G45050 33.036 2.84e-14 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme227226g00001 - - gmx:100798685 151.754