Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme22689g00001 TTCTACGTTGAGCCTGTGCAGAATCTGGACTCATATGGCTTACCTTCGAGTGAGAATATAGAAAATTATTCTTCCTCTGATAACAGCAGCCANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNGCACCTTTGAATCTGCTTCAACAAGCAACAACAGTTTCCCTTACCAAAATTCTCCGTCTACTCTCAGTTTCTCACCTAACAATAGTCCAGTGTCAAAGCTAGAGTCAAATTCATACGTGTTAAGGCCACAACATTCTCTTGAATTTGTTAATGGTTCTCCTGAGGATGATGACTCTTACTTGAGACACGACCTTGATGACTTGAGGCATAAGATGCTAGAGCTGGAATCTGTTATGCTTGGACCTAATGCAGACATGCTAGATATATACGATGCTGACGTTAAACAAGAATCTGCTTCGTTCTTATTAGAGGCAGAGAAGTGGAAGAAAAACATGGAGATGGTATCTAGAGGAGATCTGAAAGAGATGCTTTATACTTGTGCAAAAGCAGTGGATGAGAATGATATGGAGACAATTGAATGGATGGTTACCGAGTTACGCAAAATAGTATCGATTTTGGGCAATCCGGTTGAACGATTGGGAGCGTACATGTTGGAGGCTCTTGTTTCAAAGATGGCTTCTTCAGGAAGCACAATCTACAAATCGTTAAAATGTAGTGAACCTACTGGTAATGAACTACTTTCTTACATGCATGTACTTTATGAAATATGTCCATACTTTAAGTTCGGGTATATGTCGGCAAATGGAGCGATTGCTGAAGCTATGAAGGAGGAAAGTCAAGTACACATAATTGATTTTCAAATTACTCAAGGAACTCAGTGGGTGAGTCTGATCCAGGCTCTTGCTCGCAGGCCTGGNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNGGAAGGTTATCAACGCTTGCACAGTCATGTCATGTACCCTTTGAGTTCAATGCTGTTAGAGTTCCTGCTTCTGAGGTGCAACTCGAAGACTTTGAACTTCGACATGGTGAAGCTGTGGCGGTGAATTTTGCGCTTATGCTACACCATGTGCCGGATGAAAGTGTCAACATTCATAATCATCGTGACCGGTTGTTGCGATTGGCTAAGCACAT 1181 0.3768 FYVEPVQNLDSYGLPSSENIENYSSSDNSSXXXXXXXXXXXXXXTFESASTSNNSFPYQNSPSTLSFSPNNSPVSKLESNSYVLRPQHSLEFVNGSPEDDDSYLRHDLDDLRHKMLELESVMLGPNADMLDIYDADVKQESASFLLEAEKWKKNMEMVSRGDLKEMLYTCAKAVDENDMETIEWMVTELRKIVSILGNPVERLGAYMLEALVSKMASSGSTIYKSLKCSEPTGNELLSYMHVLYEICPYFKFGYMSANGAIAEAMKEESQVHIIDFQITQGTQWVSLIQALARRPGXXXXXXXXXXXXXXXXXXXXXXXXXXXGRLSTLAQSCHVPFEFNAVRVPASEVQLEDFELRHGEAVAVNFALMLHHVPDESVNIHNHRDRLLRLAKH 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme22689g00001 393 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 129 383 IPR005202 -
Trme22689g00001 393 ProSiteProfiles GRAS family profile. 154 393 IPR005202 -
Trme22689g00001 393 Pfam GRAS domain family 163 392 IPR005202 -
Trme22689g00001 393 MobiDBLite consensus disorder prediction 11 80 - -
Trme22689g00001 393 MobiDBLite consensus disorder prediction 11 32 - -
Trme22689g00001 393 MobiDBLite consensus disorder prediction 45 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme22689g00001 Trme-Chr22689 125 1305 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme22689g00001 73 393 GRAS Transcription Factor Family AT1G50600 48.598 2.07e-101 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme22689g00001 GRAS 3.5e-61 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme22689g00001 - - gmx:100785400 536.954