Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme22669g00001 ATGACAATTTCCAAAGATAGGGTGGTGCCATCTCCATTACCTGATAGCTGGAAACTAAAGGAGATATTTGCTACTGGGATTGTTCTTGGAGGGTATTTAGCCCTGATGACTGTAATCTTCTTCTGGGCAATGAAAGAAAACGACTTCTTCCCTGACAAATTTGGAGTTAGACACTTGAATCACGATGAAATGATGTCTGCTTTGTATCTACAAGTCAGTATTGTTAGCCAGGCTCTCATATTTGTGACTCGTTCCCGTGGTTGGTCGTTTCTTGAACGCCCCGGAGCTCTATTAGTTATTGCTTTCTTGATTGCTCAACTGATTGCTACATTAATAGCAGTATATGCTAACTGGGGATTTGCAAAGGTACAAGGAATTGGTTGGGGTTGGGCAGGAGTAATTTGGCTATACAGTGTCGTCTTCTATGTTCCCCTTGACGTGATGAAGTTTGCCATCCGCTACATATTGAGTGGCAAGGCTTGGTTGAATATGCTAGAAAACAAGACTGCGTTCACCACCAAGAAAGACTATGGAAAAGAAGAGAGGGAAGCTCAGTGGGCACTTGCTCAGAGGACTCTACATGGACTTCAACCACCAGAAGCTTCTGGTATTTTCAATGAGAAGAGCAGTTACAGAGAACTGTCCGAGATTGCTGAGCAGGCAAAGAGAAGAGCCGAACTTCACACACTCAAAGGACATGTTGAATCTGTGGTGAAGCTGAAAGGTTTGGACATTGATACTATCCAGCAGCACTACACCGT 761 0.4376 MTISKDRVVPSPLPDSWKLKEIFATGIVLGGYLALMTVIFFWAMKENDFFPDKFGVRHLNHDEMMSALYLQVSIVSQALIFVTRSRGWSFLERPGALLVIAFLIAQLIATLIAVYANWGFAKVQGIGWGWAGVIWLYSVVFYVPLDVMKFAIRYILSGKAWLNMLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPEASGIFNEKSSYRELSEIAEQAKRRAELHTLKGHVESVVKLKGLDIDTIQQHYTV 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme22669g00001 254 Gene3D - 209 254 - -
Trme22669g00001 254 Gene3D - 1 155 - -
Trme22669g00001 254 PANTHER CALCIUM-TRANSPORTING ATPASE 1 192 - -
Trme22669g00001 254 SUPERFAMILY Calcium ATPase, transmembrane domain M 3 156 IPR023298 -
Trme22669g00001 254 Coils Coil 211 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme22669g00001 Trme-Chr22669 89 1285 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme22669g00001 1 254 Primary Pumps ATPases AT4G30190 81.298 4.12e-145 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme22669g00001 K01535 - gmx:100816905 474.167