Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme22641g00001 ATGGTGTGGACGAATGTGTTTGATGGACACGGTGGAAAGCATGCAGCTGACTTTGCTTGCAATCATTTGCTAAAGTTCATTCTCGAGGATAAAGATTTCCCAGTTGATATTGAAAGGATAGTTTCTTCGGCCTTTCTGCAAACAGATAATGCATTTGCGGAAGCTTGTTCTCTCGATGCTGCCCTTGCGTCTGGCACCACTGCATTGGCTACTCTTATTATAGGAAGGTTGCTGGTGGTGGCAAATGCTGGAGATTGTCGAGCAGTGCTGTGCCGTCGTGGAAAAGCAATTGACATGTCAAGAGACCACAAACCAGTTTGCATGAAAGAGCAGAGGCGTATCGAGGCATCTGGGGGTTATGTCTACGATGGATATCTTAACGGGCAACTTAATGTTGCTCGAGCTATTGGTGACTGGCACATGGAAGGAATGAAATGCAAAGATGGCGGACCACTAAGTGCAGAGCCCGAACTCATTACTACAAAACTTACTGCTGAAGACGAATTTCTCATCATAGGCTGCGATGGGATTTGGGATGTTTTTAGAAGCCAAAATGCTGTAGATTTTGCTCGGCGCAGGCTTCAGGAGCATAACGACCCAGCCGTGTGTAGTAAGGATCTGGTTGACGAGGCTTTGAAGAGAAAAAGTGGAGACAATTTAGCTGCTGTTGTGGTTTGCTTTCAGCAGCATCCTCCTCCAAATTTGGTAGCACCGCGCTCCAGAGTGCACAGGAGCTTCTCTGCTGAAG 748 0.4706 MVWTNVFDGHGGKHAADFACNHLLKFILEDKDFPVDIERIVSSAFLQTDNAFAEACSLDAALASGTTALATLIIGRLLVVANAGDCRAVLCRRGKAIDMSRDHKPVCMKEQRRIEASGGYVYDGYLNGQLNVARAIGDWHMEGMKCKDGGPLSAEPELITTKLTAEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPAVCSKDLVDEALKRKSGDNLAAVVVCFQQHPPPNLVAPRSRVHRSFSAE 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme22641g00001 249 CDD PP2Cc 6 227 IPR001932 -
Trme22641g00001 249 ProSiteProfiles PPM-type phosphatase domain profile. 1 227 IPR001932 -
Trme22641g00001 249 PANTHER PROTEIN PHOSPHATASE 2C 6 225 IPR015655 GO:0004722|GO:0006470
Trme22641g00001 249 Coils Coil 247 249 - -
Trme22641g00001 249 SUPERFAMILY PP2C-like 6 229 IPR036457 -
Trme22641g00001 249 Gene3D - 2 231 IPR036457 -
Trme22641g00001 249 Pfam Protein phosphatase 2C 5 219 IPR001932 -
Trme22641g00001 249 SMART PP2C_4 1 225 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme22641g00001 Trme-Chr22641 71 1222 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme22641g00001 3 249 PP2C-type Phosphatase Gene Family AT2G25620 76.096 2.58e-143 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme22641g00001 K14803 - gmx:100815725 448.743