Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme22633g00001 AAGGAGAAAGTTCCAGATAATGAGGAACAACTTGCTCACTGGTCTTTGCCAGACGATGACCTTGTTTTACTAGCTATTGTTGGTATCAAGGACCCTTGTCGACCTGGTGTCAAAGATTCAGTACAGCTTTGCCAAAAAGCCGGGGTTAAGGTAAAGATGGTCACGGGCGACAATGTGAAAACTGCAAAGGCAATTGCTGTGGAATGTGGAATACTTAGTTCACTTGCTGATGCTACTGAGAGAACTGTCATTGAAGGCAAAACATTTCGAGCCTTGTCAGATTCAGAGCGAGAAGAAATTGCGGACTCGATATCGGTTATGGGAAGGTCATCTCCCAATGACAAACTATTGTTAGTACAAGCATTAAGGAGGAAGGGTCATGTTGTGGCTGT 392 0.4413 KEKVPDNEEQLAHWSLPDDDLVLLAIVGIKDPCRPGVKDSVQLCQKAGVKVKMVTGDNVKTAKAIAVECGILSSLADATERTVIEGKTFRALSDSEREEIADSISVMGRSSPNDKLLLVQALRRKGHVVAV 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme22633g00001 131 Pfam haloacid dehalogenase-like hydrolase 22 130 - -
Trme22633g00001 131 SUPERFAMILY HAD-like 18 130 IPR036412 -
Trme22633g00001 131 Gene3D - 17 32 IPR023299 GO:0000166
Trme22633g00001 131 PANTHER CATION TRANSPORTING ATPASE 9 131 - -
Trme22633g00001 131 FunFam copper-transporting ATPase 1 isoform X2 27 72 - -
Trme22633g00001 131 Gene3D - 33 131 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme22633g00001 Trme-Chr22633 1 1305 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme22633g00001 2 131 Primary Pumps ATPases AT5G57110 76.923 1.62e-63 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme22633g00001 K01537 - gmx:100792945 224.557