Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme22621g00001 ATGCTTGGAGTTGTTTATCGTGACCTTAAACCTGAAAACGTACTAGTACGAGAAGATGGTCACATAATGCTCTCGGACTTCGATCTTTCTCTTAGATGTGTTGTGTCACCTACCCTTATCAGAACTCACGACGGAGACCCTTCAAAACGGGCTGGTGGTGGTGCATTCTGTGTCCAGCCTGCTTGTATCGAGCCTACATCTGTATGCATCCAGCCTGCCTGTTTTATGCCTAAGCTTTTCCCTCAAAAAAACAAAAAATCGCGGAAGCCTAAAGCTGATCCCGGCCTGACAACTAGCGCACTTCCGGAACTTCTTGCTGAGCCTACAACTGCTCGGTCGATGTCCTTCGTTGGAACTCATGAGTATCTTGCCCCTGAAATTATCAAAGGAGAAGGTCATGGAAGTGCAGTTGATTGGTGGACATTTGGCATATTCTTGCACGAGTTGTTGTATGGTAAAACCCCTTTCAAAGGATCAGGAAACCGAGCCACGCTGTTTAACGTAGTAGGGCAGCAGCTCAAGTTTCCCGAATCGCCGGCTACAAGTTATGCCAGCCGTGATCTGATCCGTGGTTTGCTGGTGAAGGAGCCACAGAACCGTCTTGGAGTGAAGAGGGGTGCAACTGAGCTGAAACAGCATCCTTTCTTTGAAGGTGTGAACTGGGCGCTGATTAGGTGCAGCACGCCGCCGGAAATTCCAAGACCGATGGAAAGTGAACAACCAGCAAAGTTTGAAGCAGTTAATAATACTGTTGGGGTTGGGAGCAA 767 0.4837 MLGVVYRDLKPENVLVREDGHIMLSDFDLSLRCVVSPTLIRTHDGDPSKRAGGGAFCVQPACIEPTSVCIQPACFMPKLFPQKNKKSRKPKADPGLTTSALPELLAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLVKEPQNRLGVKRGATELKQHPFFEGVNWALIRCSTPPEIPRPMESEQPAKFEAVNNTVGVGS 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme22621g00001 255 ProSitePatterns Serine/Threonine protein kinases active-site signature. 4 16 IPR008271 GO:0004672|GO:0006468
Trme22621g00001 255 Gene3D Phosphorylase Kinase; domain 1 235 245 - -
Trme22621g00001 255 Gene3D Transferase(Phosphotransferase) domain 1 111 234 - -
Trme22621g00001 255 Pfam Protein kinase domain 113 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme22621g00001 255 ProSiteProfiles Protein kinase domain profile. 1 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme22621g00001 255 FunFam serine/threonine-protein kinase D6PK-like 111 234 - -
Trme22621g00001 255 SUPERFAMILY Protein kinase-like (PK-like) 3 242 IPR011009 -
Trme22621g00001 255 Gene3D Transferase(Phosphotransferase) domain 1 1 93 - -
Trme22621g00001 255 PANTHER FLIPPASE KINASE 1-RELATED 1 239 - -
Trme22621g00001 255 SMART serkin_6 1 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme22621g00001 Trme-Chr22621 540 1306 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme22621g00001 1 255 AGC Kinase Gene Family AT2G44830 79.231 1.07e-137 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Trme22621g00001 Pkinase 8.9e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme22621g00001 - - gmx:100818352 471.47