Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme22605g00001 ATGACAGATCATGAGATGGTAGATATGCATGAACATACCACCATGATTAGCTCCGATGAAATACATGAAAGTGCTATTGATGCAGATCCCCTAAATGATAGAATATCATCAGAGCTCGCTTTAGAGCCCTTTGAAGGAATGGAGTTTGCATCAATTGAAGATGTAAAGAATTACTACGTAAGCTACGCCAAGAAGAAAGGTTTTAGCTTTCGCATGGGCCGCGTTACCAAATCAAGAACAGACGGTGTGGTAATTGGTCAACAGATTCTTTGTTCAAAGGAAGGGTTTAGGTCCAACAAAAATTTGAAAAAAGAAAATGGTAGTCTGATAGTTCATGATGAAACAAGGGTAGGATGCAAGGCAATGTTGTATATCAAGAAAAAGGAAGATAGGCCCTAG 399 0.391 MTDHEMVDMHEHTTMISSDEIHESAIDADPLNDRISSELALEPFEGMEFASIEDVKNYYVSYAKKKGFSFRMGRVTKSRTDGVVIGQQILCSKEGFRSNKNLKKENGSLIVHDETRVGCKAMLYIKKKEDRP 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme22605g00001 132 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 5 130 - -
Trme22605g00001 132 Pfam FAR1 DNA-binding domain 57 130 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme22605g00001 Trme-Chr22605 743 1278 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trme22605g00001 FAR1 9.2e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme22605g00001 - - tpra:123904109 170.244