Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme225930g00001 ATGGTTACTTCACTTTCTTTGGCCATCTCCTACCCAACTCTTGCAGCTGCACCTCACATGTTCGTCAATGCCTACAAGAATGTTCTTTCTATTGCAGTGGCAACTGAATATTCTTTCCCTGAGGCTGACAAGGTTAAGGAGTTCTTGAAGGACCCAAGTAAGTTTGCTGTAGCTGCTGTTGCTGCCCCGGCTGCTGCTTCTGGTGCTGCCCCTGCTGCAGCCAAGGAGGAGGAGAAGAAGCCTGAGCCAGAAGAAGAATCTGATGAAGAAATGGGTTTT 279 0.4875 MVTSLSLAISYPTLAAAPHMFVNAYKNVLSIAVATEYSFPEADKVKEFLKDPSKFAVAAVAAPAAASGAAPAAAKEEEKKPEPEEESDEEMGF 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme225930g00001 93 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 78 - -
Trme225930g00001 93 MobiDBLite consensus disorder prediction 65 93 - -
Trme225930g00001 93 Pfam 60s Acidic ribosomal protein 11 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme225930g00001 Trme-Chr225930 1 367 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme225930g00001 1 93 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 66.667 2.57e-32 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme225930g00001 K02941 - vvi:100254737 107.457