Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme22577g00001 ATGGTGTTTGACGGAGAAGCAGCGGCGTCGTTGGTGAAGGAGCTGAGGTTGAGCTTCAATTCTGGTAAGACAAGAAGTTATGAATGGAGAATATCACAGGTGAAGGCTTTTTTGAAGATGGTTGTTGAACAAGAGGATCAAATTGTTGAAGCTCTTCGTTCTGATCTTGCTAGACCACCTCTTGAAACCGTTGTCTATGAG 201 0.4378 MVFDGEAAASLVKELRLSFNSGKTRSYEWRISQVKAFLKMVVEQEDQIVEALRSDLARPPLETVVYE 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme22577g00001 67 PANTHER ALDEHYDE DEHYDROGENASE 7 67 IPR012394 GO:0006081
Trme22577g00001 67 SUPERFAMILY ALDH-like 8 64 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme22577g00001 Trme-Chr22577 267 467 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme22577g00001 3 67 Aldehyde Dehydrogenase Gene Family AT4G34240 53.846 1.09e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme22577g00001 K00128 - gmx:100783726 104.375