Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme225415g00001 GATGTTGGAATGGCAATAGGTGCTGGCACAGACATTGCTATTGAGGCAGCTGATATTGTACTGATGAAGAGCAACTTGGAGGATGTCATAACTGCCATTGATCTTTCAAGAAAAACATTTTCTCGTATACGCCTCAATTATGTTTGGGCTTTGGGTTATAATTTGCTTGGCATTCCAATAGCAGCTGGAGTTCTTTTCCCTTCCACAGGCTTTCGATTGCCGCCTTGGATTGCTGGAGCTGCTATGGCTGCCTCTTCTGTCAGTGTTGTTTGCTGTTCTCTATTGTTGAAATATTACAAAAGACCCAAGAAGCTGAACACCCTTGACATAGGAGCCATAACGATCGAGACATCGAGCGACCCTTTGATCATTCATGATGATTGA 384 0.4349 DVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYVWALGYNLLGIPIAAGVLFPSTGFRLPPWIAGAAMAASSVSVVCCSLLLKYYKRPKKLNTLDIGAITIETSSDPLIIHDD 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme225415g00001 127 SUPERFAMILY HAD-like 1 93 IPR036412 -
Trme225415g00001 127 Gene3D - 1 54 IPR023214 -
Trme225415g00001 127 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 1 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme225415g00001 Trme-Chr225415 24 407 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme225415g00001 1 116 Primary Pumps ATPases AT1G63440 90.517 1.46e-66 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme225415g00001 K17686 - dcr:108201003 198.364