Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2244g00001 GTTCTCATAGACAAGGACAAGGCAACTACAAATTTTGCAAAGTTGTCAAATCATTTTCTAATTGTTGTGTCAATGGAGAATGGTGTATACAATGTTCCAATGAACATGGCTGGTCAAATTTCTAATGTCATAGAAGATATCACACAAAAGCCACTCATTCATTGCTATTCATTTGACCTTAACAATCAAACCATTATAAATGGAATTCCAATACTTTCATGTGAACAAAATCAACAACATGTTGATGGTAGTAGTAGTAGTTTCATAAACCATTCAACTATTGCTGATTCTACTTCATTTGTTACATCACAACATGGAAGGACTATTGTGGAAAATCCCTCAAATCTTATTGTTAACAACAATGATTTTTCAGTTCCTGCTAGAATTGGTCTTCAAGAAAATTTTGAAGCTATGGTGGTTCCATACATGTTCAATAATTGGAATGATGCATCAAACTCAAACCCTTTGTGTGCAACTTTTGGTGATAATAGTAACCATGTCAACAAGTTTTTGAAAGCTCAAGAGGGTAATGGTAATGGATTCATGTCATATTCGTCGATAGCAAACATTGATCCGAACGGATGGCAATTGTCACATGCTGCAAACTTAACAAATGTTGCTTATAGTTCATCAAATTGTAGCAATGAACTTTCACCAAGTCTTGCAACATCTCCAAATTCAGGTCAGTGTTCAGAGATTAGTTGCTCTGACTTGACTCATAGCATGAATGGAACAAGATCGGGTTTGGAACAAGCCTCATGTAGTAGTATGGAACTTTCTATGAGTTTAGGGAATGATAAACATGTTAAATTTTCGCCGGCGATATTAGGATCGAGATATCTTGCTGTAATTCAGGATATACTTGTTCAAATTGCAACATATTCATTTGAAAATCTAAATCTTGATGAGATAAACCATTCGGCTTCCGGTGTTAGAGGAGGACGAGGAAATAAATCAAGTTCATCGAATACAGACAAGCGAAGGATAGGAGTAAACCGCGACACTAGTTCTATGTCAGAAGCATATGCTGATTCTTCATTGCAAAGACATGCCGCTGAATCAAAGAAATCACAACTTCTGATGCTTCTACAGCTGGTGGACGGCCAATATAGTCGATGTTTGGCTGAGATTCACACCGTTGTATCTGCATTTCATGCTGCTACTGAGCTTGATCCTCAAATACATGCGCATTTTGCTGTTAAAACAGTTGATCGACTATAKAAGGATTTGAGAGAGAGGATTAGTAATCATATTCTTGCCATGGGATCTAATTTCAACAGTTCATGGTCAGAAGAGGATAATGAATTGTCGGTTGAAACTTCATTCATTCAAAAGCAATGGGCTCTCCAACAGTTGAAAAGGAAAGACCAGTTATGGAGGCCACAAAGGGGCTTGCCTGAAAAATCTGTTTCGGTTCTTCGTGATTGGATGTTTCAGAATTTCCTCCATCCGTGA 1455 0.3732 VLIDKDKATTNFAKLSNHFLIVVSMENGVYNVPMNMAGQISNVIEDITQKPLIHCYSFDLNNQTIINGIPILSCEQNQQHVDGSSSSFINHSTIADSTSFVTSQHGRTIVENPSNLIVNNNDFSVPARIGLQENFEAMVVPYMFNNWNDASNSNPLCATFGDNSNHVNKFLKAQEGNGNGFMSYSSIANIDPNGWQLSHAANLTNVAYSSSNCSNELSPSLATSPNSGQCSEISCSDLTHSMNGTRSGLEQASCSSMELSMSLGNDKHVKFSPAILGSRYLAVIQDILVQIATYSFENLNLDEINHSASGVRGGRGNKSSSSNTDKRRIGVNRDTSSMSEAYADSSLQRHAAESKKSQLLMLLQLVDGQYSRCLAEIHTVVSAFHAATELDPQIHAHFAVKTVDRLXKDLRERISNHILAMGSNFNSSWSEEDNELSVETSFIQKQWALQQLKRKDQLWRPQRGLPEKSVSVLRDWMFQNFLHP 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2244g00001 484 SMART prehox3 269 416 IPR006563 -
Trme2244g00001 484 MobiDBLite consensus disorder prediction 312 326 - -
Trme2244g00001 484 MobiDBLite consensus disorder prediction 307 335 - -
Trme2244g00001 484 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 215 484 - -
Trme2244g00001 484 Pfam Associated with HOX 275 415 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme2244g00001 Trme-Chr2244 211 2229 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme2244g00001 215 484 Homeobox Transcription Factor Family AT4G32980 49.265 1.30e-66 220