Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme22421g00001 GAAGCACGCCCTCCAGGAATCTATAAACCCGATTATATTGATGCATTGTACACATTTTATCATGAGAAAAAGCCTGAGATGGTAGTTTGTCCTCCTACTCCGGAGTGGAAAAGATCTTCTGAATTTGATCTCAATGGTGAAGCAGTTCCAGACGATGATGATGATGGATTACCGGGTCCTGATTTGCAGGTACTAGGCTTCTTCTTAACAGTGGGAAACAGAAGGAAAACAAGATGA 237 0.4219 EARPPGIYKPDYIDALYTFYHEKKPEMVVCPPTPEWKRSSEFDLNGEAVPDDDDDGLPGPDLQVLGFFLTVGNRRKTR 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme22421g00001 78 Gene3D Protein tyrosine phosphatase superfamily 1 56 IPR029021 -
Trme22421g00001 78 PANTHER MRNA-CAPPING ENZYME 1 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme22421g00001 Trme-Chr22421 1 358 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme22421g00001 1 49 Protein tyrosine phosphatase (PTP) family AT5G01290 87.755 1.29e-25 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme22421g00001 K13917 - lja:Lj3g3v1603870.1 125.561